Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0941 ATGGAACACAACTTCGGCCATCCAGATTCTCTTCCTGTACCTGGGTCCTTTGATAAGTCTAGGGTTTTGAGTGTTAAGCCAATTAGAACCCTTGTTCCTGTGTTCCCTTCATCTAATCCGTCGTCATCGACAAATCCACAAGGTGGTGCTCCTTTTGTTTGTGTCTCTCCTTCTGGTCCTTACCCATCTGGTGTTGCACCCCTTTACCCATTCTTTGTCTCGCCTGAATCCCAGAGGCTCTCTGAACAAAATGCACAAACACCAGTTGGTCAACGTGTGCCTACAGGCCCGATATCTACTGCTGTTCCAATTAATTCATTTAGGACACCAACCGGGGCCGCAAATGGAGATGTGGGATCGTCCCAAAGGAAGAACAAAAGTGGTGGACAGTTCAATGAGGAAGATGATTATGTTGAGATGAATGAATTTGATGCTGAAGATGGAGCTGGAGATACGAGCCGTAAACGCAAGTCGGGGAAGAAGGGAAGAAAGCTTAAGGGTGCTGTTGGCACAGCGTCTAGTGTTAATCCTGAAGCAGTGGCTAATGATATTTTCAAATCAATTAACCCCTTAGTTTTCGATGTACTTAGTCAACCTGATGGTTCCAGGGACTCGGTTATATATACACTTCTGGTATATGAAGTGCTAAGAAGAAAGATCGGACAAGTAGAAGAGACAGCAAAGGATGTTTCTGGGGCAAAACGACCTGATTTGAAGGCAGGTGCACTTATGCTGACTAAAGGGATTCGGGCAAATAGCAAGAAAAATATTGGAGCCGTGCGGGGTGTTGAAGTTGGGGATATTTTCTATTTTAGAATTGAATTGTGCTTAGTGGGATTACATGCTCCTTCTATGGCTGGAATTGATTACATCGGTACCAAAACCAGTCAGGAGGAAGAGCCTTTAGCTGTCAGTATTGTCTCATCCGGGGGATATGAAGATAATGTCGAGGATGGGGATGTTCTGATTTACACTGGCCAAGGTGGGGTTAGCAAAGAGAAGGGAGCGAGTGATCAAAAGCTTGAAAGAGGCAATCTTGCATTGGAAAAGAGCATGCACAGAGGTAATGATGTGAGAGTGATTAGGGGTTTAACGGATTTAGCACATCCAACTGGGAAGGTGTATGTCTATGACGGTCTTTACAAGATCCAGAACACTTGGGTGGAGAAAGCAAAAAATGGTTTCAATGTGTTCAAGTACAAATTAGTCAGGTGTCCTGGGCAGCCTGCAGCATATATGATTTGGAAATCCATTCAGCAATGGACTGAGAAAAATGTTCCTAGGACGGGGGTTATATTGCCTGATCTTACTTCATCGGCAGAAAAAATACCTGTCTGTCTTGTGAATGATGTTGATAATGAGAAGGGCCCTGCGTATTTCACCTACTCCCCTACCCTCAAGAACTTGAAGCCAACAGCTCCTATGGAATCTTCTACTGGATGTTCTTGTGTTGGTGGGTGCCAACCTGACAATTATAACTGTTCTTGCATGCAAAATAGTGGAGGTTTTCTCCCATATTCTGCAATGGGGATACTTTGGGACCTAAAATCCGTTGTATATGAGTGTGGTCCTTCCTGTCAGTGCCCTCCTACTTGCCGAAGTCGGGTTTCCCAAGGTGGCTTGAAAATTCGTTTGGAGGTGTTCAGAACCAAGGATAAGGGTTGGGGTCTAAGATCATGGGATTCTATTCGTGCAGGAACTTTCATATGTGAGTATGCTGGAGAAGTCATAGATAATGCTAGAGTAGAGGAGCTTGTTGGTGAAAATGAAGATGATTATATTTTTGACTCTACTCGCATTTATCAGCAACTGGACGTTTTTCCTAGCGATACCGAAGCTCCAAAGATCCCATCTCCCCTTTATATAACAGCAAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCGAATGTGTTATGGCGTCCAGTTGTACGTGGAAATAGGAATGAATCTGATCTCCATGTTGCTTTCTATGCAATTAGACATATCCCTCCAATGACGGAGTTAACTTATGATTATGGGATAGTTCTTTCTCTGAAACCAGGACAGAAGAAAAAGAAATGCTTGTGTGAATCTGTGAAATGCCGGGGTTACTTTTGTTAA 2115 0.4369 MEHNFGHPDSLPVPGSFDKSRVLSVKPIRTLVPVFPSSNPSSSTNPQGGAPFVCVSPSGPYPSGVAPLYPFFVSPESQRLSEQNAQTPVGQRVPTGPISTAVPINSFRTPTGAANGDVGSSQRKNKSGGQFNEEDDYVEMNEFDAEDGAGDTSRKRKSGKKGRKLKGAVGTASSVNPEAVANDIFKSINPLVFDVLSQPDGSRDSVIYTLLVYEVLRRKIGQVEETAKDVSGAKRPDLKAGALMLTKGIRANSKKNIGAVRGVEVGDIFYFRIELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYTGQGGVSKEKGASDQKLERGNLALEKSMHRGNDVRVIRGLTDLAHPTGKVYVYDGLYKIQNTWVEKAKNGFNVFKYKLVRCPGQPAAYMIWKSIQQWTEKNVPRTGVILPDLTSSAEKIPVCLVNDVDNEKGPAYFTYSPTLKNLKPTAPMESSTGCSCVGGCQPDNYNCSCMQNSGGFLPYSAMGILWDLKSVVYECGPSCQCPPTCRSRVSQGGLKIRLEVFRTKDKGWGLRSWDSIRAGTFICEYAGEVIDNARVEELVGENEDDYIFDSTRIYQQLDVFPSDTEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPVVRGNRNESDLHVAFYAIRHIPPMTELTYDYGIVLSLKPGQKKKKCLCESVKCRGYFC 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0941 704 ProSiteProfiles Pre-SET domain profile. 479 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal8g0941 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 13 703 - -
Lal8g0941 704 Pfam SET domain 554 678 IPR001214 GO:0005515
Lal8g0941 704 ProSiteProfiles SET domain profile. 543 678 IPR001214 GO:0005515
Lal8g0941 704 SMART set_7 543 684 IPR001214 GO:0005515
Lal8g0941 704 SMART G9a_1 253 408 IPR003105 -
Lal8g0941 704 ProSiteProfiles YDG domain profile. 258 404 IPR003105 -
Lal8g0941 704 MobiDBLite consensus disorder prediction 79 127 - -
Lal8g0941 704 Gene3D SET domain 426 703 IPR046341 -
Lal8g0941 704 Pfam SAD/SRA domain 257 408 IPR003105 -
Lal8g0941 704 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 13 703 - -
Lal8g0941 704 MobiDBLite consensus disorder prediction 79 172 - -
Lal8g0941 704 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 703 IPR025794 GO:0016571
Lal8g0941 704 ProSiteProfiles Post-SET domain profile. 688 704 IPR003616 -
Lal8g0941 704 SMART preset_2 433 527 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal8g0941 704 Gene3D - 241 425 IPR036987 -
Lal8g0941 704 SUPERFAMILY PUA domain-like 241 425 IPR015947 -
Lal8g0941 704 SUPERFAMILY SET domain 419 684 IPR046341 -
Lal8g0941 704 Pfam Pre-SET motif 438 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0941 Lal-Chr8 7142049 7144163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0941 9 703 Su(var)3-9 homologs AT1G73100 47.141 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal8g0941 SAD_SRA 1.6e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0941 K24405 - gmx:100805932 1125.54