Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0940 ATGGAACACAACTTTGGCCATCCAGATTCTCTTCCTGTACCTGGGTCCTTTGATAAGTCTAGGGTTTTGAGTGTTAAGCCAGTTAGAACCCTTGTTCCTGTGTTCCCTTCATCTAATCCGTCGTCATCGACAAATCCACAAGGTGGTGCTCCTTTTGTTTGTGTCTCTCCTTCTGGTCCTTACCCATCTGGTGTTGCACCCCTTTACCCATTCTTTGTCTCGCCTGAATCCCAGAGGCTCTCTGAACAAAATGCACAAACACCAGTTGGTCAACGTGTGCCTACAGGCCCGATATCTACTGCTGTTCCAATTAATTCATTTAGGACACCAACCGGGGCCGCAAATGGAGATGTGGGATCGTCCCAAAGGAAGAACAAAAGTGGTGGACAGTTCAATGAGGAAGATGATTATGTTGAGATGAATGAATTTGATGCTGAAGATGGAGCTGGAGATACGAGCCGTAAACGCAAGTCGGGGAAGAAGGGAAGAAAGCTTATGGGTGCTGTCGGCACAGCGTCTAGTGTTAATCCTGAAGCAGTGGCTAATGATATTTTCAAATCAATTAACCCCTTAGTTTTCGATGTACTTAGTCAGCCTGATGGTTCCAGGGACTCGGTTATATATACACTTCTGGTATATGAAGTGCTAAGAAGAAAGCTCGGACAAATAGAAGAGACAGCAAAGGATGTTGCTGGGGCAAAACGACCTGATTTGAAGGCAGGTGCACTTATGCTGACTAAAGGGATTCGGGCAAATAGCAAGAAAAATATTGGAGCCGTGCGGGGTGTTGAAGTTGGGGATATTTTCTATTTTAGAATTGAATTGTGCTTAGTGGGATTACATGCTCCTTCTATGGCTGGAATTGATTACATCGGTACCAAAACCAGTCAGGAGGAAGAGCCTTTAGCTGTCAGTATTGTCTCATCCGGGGGATATGAAGATAATGTCGAGGATGGGGATGTTCTGATTTACACTGGCCAAGGTGGGGTTAACAAAGAGAAGGGAGCGAGTGATCAAAAGCTTGAAAGAGGCAATCTTGCATTGGAAAAGAGTATGCACAGAGGTAATGATGTGAGAGTGATTAGGGGTTTAACGGATTTAGCACATCCAACTGGGAAGGTGTATGTCTATGACGGTCTTTACAAGATCCAGAACACTTGGGTGGAGAAAGCAAAAAATGGTTTCAATGTGTTCAAGTACAAATTAGTCAGGTGTCCTGGGCAGCCTGCAGCATATATGATTTGGAAATCCATTCAGCAATGGACTGAGAAAAATGTTCCTAGGACGGGGGTTATATTGCCTGATCTTACTTCATCGGCAGAAAAAATACCTGTCTGTCTTGTGAATGATGTTGATAATGAGAAGGGCCCTGCGTATTTCACCTACTCCCCTACCCTCAAGAACTTGAAGCCAACAGCTCCTATGGAATCTTCTACTGGATGTTCTTGTGTTGGTGGGTGCCAACCTGACAATTATAACTGTTCTTGCATGCAAAATAGTGGAGGTTTTCTCCCATATTCTGCAATGGGGATACTTTGGGACCTAAAATCCGTTGTATATGAGTGTGGTCCTTCCTGTCAGTGCCCTCCTACTTGCCGAAGTCGGGTTTCCCAAGGTGGCTTGAAAATTCGTTTGGAGGTGTTCAGAACCAAGGATAAGGGTTGGGGTCTAAGATCATGGGATTCTATTCGTGCAGGAACTTTCATATGTGAGTATGCTGGAGAAGTCATAGATAATGCTAGAGTAGAGGAGCTTGTTGGTGAAAATGAAGATGATTATATTTTTGACTCTACTCGCATTTATCAGCAACTGGACGTTTTTCCTAGCGATACCGAAGCTCCAAAGATCCCATCTCCCCTTTATATAACAGCAAAAAATGAAGGGAATGTTGCTCGGTTTATGAATCACAGCTGCTCTCCGAATGTGTTATGGCGTCCAGTTGTACGTGGAAATAGGAATGAATCTGATCTCCATGTTGCTTTCTATGCAATTAGACATATCCCTCCAATGACGGAGTTAACTTATGATTATGGGATAGTTCTTTCTCTGAAACCAGGACAGAAGAAAAAGAAATGCTTGTGTGAATCTGTGAAATGCCGGGTTCTAGCTATAGCAGACAGCAGGATGGAAGTTTGA 2136 0.4387 MEHNFGHPDSLPVPGSFDKSRVLSVKPVRTLVPVFPSSNPSSSTNPQGGAPFVCVSPSGPYPSGVAPLYPFFVSPESQRLSEQNAQTPVGQRVPTGPISTAVPINSFRTPTGAANGDVGSSQRKNKSGGQFNEEDDYVEMNEFDAEDGAGDTSRKRKSGKKGRKLMGAVGTASSVNPEAVANDIFKSINPLVFDVLSQPDGSRDSVIYTLLVYEVLRRKLGQIEETAKDVAGAKRPDLKAGALMLTKGIRANSKKNIGAVRGVEVGDIFYFRIELCLVGLHAPSMAGIDYIGTKTSQEEEPLAVSIVSSGGYEDNVEDGDVLIYTGQGGVNKEKGASDQKLERGNLALEKSMHRGNDVRVIRGLTDLAHPTGKVYVYDGLYKIQNTWVEKAKNGFNVFKYKLVRCPGQPAAYMIWKSIQQWTEKNVPRTGVILPDLTSSAEKIPVCLVNDVDNEKGPAYFTYSPTLKNLKPTAPMESSTGCSCVGGCQPDNYNCSCMQNSGGFLPYSAMGILWDLKSVVYECGPSCQCPPTCRSRVSQGGLKIRLEVFRTKDKGWGLRSWDSIRAGTFICEYAGEVIDNARVEELVGENEDDYIFDSTRIYQQLDVFPSDTEAPKIPSPLYITAKNEGNVARFMNHSCSPNVLWRPVVRGNRNESDLHVAFYAIRHIPPMTELTYDYGIVLSLKPGQKKKKCLCESVKCRVLAIADSRMEV 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0940 711 ProSiteProfiles Pre-SET domain profile. 479 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal8g0940 711 MobiDBLite consensus disorder prediction 86 165 - -
Lal8g0940 711 ProSiteProfiles SET domain profile. 543 678 IPR001214 GO:0005515
Lal8g0940 711 SMART set_7 543 684 IPR001214 GO:0005515
Lal8g0940 711 ProSiteProfiles YDG domain profile. 258 404 IPR003105 -
Lal8g0940 711 SUPERFAMILY SET domain 419 684 IPR046341 -
Lal8g0940 711 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 102 710 IPR025794 GO:0016571
Lal8g0940 711 Pfam SAD/SRA domain 257 408 IPR003105 -
Lal8g0940 711 Gene3D - 241 425 IPR036987 -
Lal8g0940 711 SMART preset_2 433 527 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal8g0940 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 13 700 - -
Lal8g0940 711 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 13 700 - -
Lal8g0940 711 Gene3D SET domain 426 702 IPR046341 -
Lal8g0940 711 Pfam SET domain 554 678 IPR001214 GO:0005515
Lal8g0940 711 MobiDBLite consensus disorder prediction 86 127 - -
Lal8g0940 711 Pfam Pre-SET motif 438 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lal8g0940 711 SMART G9a_1 253 408 IPR003105 -
Lal8g0940 711 SUPERFAMILY PUA domain-like 241 425 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0940 Lal-Chr8 7122008 7125168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0940 9 700 Su(var)3-9 homologs AT1G73100 47.059 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal8g0940 SAD_SRA 1.1e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0940 K24405 - gmx:100805932 1118.22