Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0926 ATGGATGAGACACTAACTTTGGGTGATGGTAGCATCCCTATTGTTGGTGAAACATCTCCATCAAAGTCTTCAAAACTAAAGACTTCAAATGATGAGTTAGATTCTTCATTGAAATCTGTTGAGCCTTCCAATGATGGAGATCATAAAGAAAACCCATCACTTGATTATGCTTGTAAATATTGTGATAAAAAGTTCACAAGCTCCCAAGCACTTGGGGGGCACCAAAATGCTCATAAGCATGAGAGATTCCTGAGAAAAGAGAAGGAAAAAATCATGTATGGTCATGAATTTGGTGCAAGGTTTTCAACACTTACATTTCCAAGCATGCGTAACTACTACCAAGGTTCATCTTCACACTTTGGCAATGGTGTTCAATTGCACCACCCTATGTCTCAAATGCTTAACATGTCTTTACCTCGTTATTCAACACTTGGCTATGGTCATTTCCAAGGGCTAAAATTCTCCAACACACCCCTCTCTGAACACCAATTTGGGAACAATACTAGTTCTTTTGGTGGTGCTGCAATTGCACCAAGATTCAACATTCAACAAGGGTTGAGACTTTTCAATGGACTCAGTCCAATTTCTCCAACTTTTAACAATGGGGTGGCTAATCAAAATCAAGATCATGCTTGTGTTGGAAACCCTATTGAAAATCCTAGTGTGACTCTTGCTGCAACTCAAGCCTTTAATGTGTCTCATGATTCACCTCAAGCCTTAGAAGAGATTGATTTAACTCTCAAACTTTGA 750 0.3907 MDETLTLGDGSIPIVGETSPSKSSKLKTSNDELDSSLKSVEPSNDGDHKENPSLDYACKYCDKKFTSSQALGGHQNAHKHERFLRKEKEKIMYGHEFGARFSTLTFPSMRNYYQGSSSHFGNGVQLHHPMSQMLNMSLPRYSTLGYGHFQGLKFSNTPLSEHQFGNNTSSFGGAAIAPRFNIQQGLRLFNGLSPISPTFNNGVANQNQDHACVGNPIENPSVTLAATQAFNVSHDSPQALEEIDLTLKL 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0926 249 Pfam C2H2-type zinc finger 56 79 - -
Lal8g0926 249 MobiDBLite consensus disorder prediction 1 51 - -
Lal8g0926 249 ProSitePatterns Zinc finger C2H2 type domain signature. 58 80 IPR013087 -
Lal8g0926 249 Gene3D Classic Zinc Finger 22 101 - -
Lal8g0926 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Lal8g0926 249 PANTHER OS02G0182300 PROTEIN 24 249 - -
Lal8g0926 249 PANTHER ZINC FINGER PROTEIN JAGGED 24 249 IPR045320 GO:0003700
Lal8g0926 249 SUPERFAMILY beta-beta-alpha zinc fingers 48 92 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0926 Lal-Chr8 6935589 6936338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0926 56 161 C2H2 Transcription Factor Family AT5G25160 36.036 4.04e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal8g0926 zf-C2H2_6 2.8e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0926 - - lang:109358021 397.897