Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0925 ATGGCATTATCTCAGTTGAACCACTCTCTTGAAAATGAACTCCAAACTGAAGAATTCCCATATTTCCCTCTCATTTATATTGGAAATGAAGGCCTCACAAAAAGGGTTATCAGAAAAGGTCTCACTTGGCAAACTCCTTTCTTTGGAGACGAAGTTGAAGTTCATTTCAGAGGAAAAGTCGAGAATGGGTCTTCTCTTGAATCCAGTTATGATAAAGGATCCTCATTTCGTTTCAAATTAGGCCAATGTGAAGTTATCAAAGGTTGGGATGAAGGAGTTGCCACCATGAAGAAAGGAGAGATAGCAATCTTCAAAATACCACCTAACTTAGCATATGGAGATGTTGGTTCACCGCCATTGATTTCGCCCGATTCAACTCTCATTTTTGACATTGAATTGCTGTCTTGGAGTACAATCAAGGAATTAACCAGTGATGGAGGAATCATGAAAAAGATAATACAAGAAGGTGAAGGATGGGCTACACCCAGAGAGAATGATGAGGTGCTAGTTAAATACGAAGCAAGGCTAGAGAGCGGGACGCTTGTCTCTATATCAGATCAAGGTGTGGAGTTTAATGTAAGTGATGGCTATCTTTGTCCTGCACTGAGTATAGCAGTGAAGACAATGAGAAAAGGCGAGGTCGCAGAGTTATCAATGAAATTCCTTTATGGGATCAGTCAAAATTCCGAAATAAACACTAAGCTTGTTGGTTGTCTTCAATCTGGTTCTAATTTAGCTACCATCAAACTTGAGCTGGTATCTTGGAAAGTCGTTACCGATGTCACGGGAGATAAGAAGATACTGAAAAAAATTATAAAAGTTGGTGAGGGGTTTGATAGGCCTAATGAAGGATCCCAAGTTAAAGTATTATATTTATGTAAACAAGATGATGGTACAATTATTGATAAGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAACTCATGAAGAACAAGTGCATGAGGGTCTAGAAAGAGCAATAATGACAATGAAGAAAGGTGAAAAAGCAATGGTGACTATAAGTTCTGAATATCTGTGTGACCAAAATGCTTTACAAGGAGACACAACCACTAATAAATTCCTTTATTATGAAGTTGAATTGGTTGATTTTGTAAAGGAGAAGCCATTTTGGAAAATGGATACTCAAGAGAAAATGGAAGCTTGTGAGAGGAAGAAACATGATGGAAATCTTCTGTTCAAGACAGAAAATTACAGCAGTGCATGCAAGAAATATGAACAAGCTATAAGATGCATCGAATTCGATCATTCGTTCAGCGATGATGAGAAGCGTCGTGCGAATACCTTACGATTATCATGCAATTTGAACAAAGCAGCTTGTAAACTTAAATTGGGAGAGTACTCTGAAGCTTCAAGACTATGCACAAAGGTGCTAGAAAAAGACCCTTTAAATGTCAAGGCTCTATACAGAAGATGCCAAGCATATCTTAAAACTTCAGACTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCCCTTATTATTGATCCAAATAATAGAGACATTAAAATTGAGTACAAGGAGCTCAAACATAAGCAGAAGCAATACAGTAGATATGAAACTGACATATTTAGCACAATGCTCTCAAGGATGGGGTAG 1617 0.3791 MALSQLNHSLENELQTEEFPYFPLIYIGNEGLTKRVIRKGLTWQTPFFGDEVEVHFRGKVENGSSLESSYDKGSSFRFKLGQCEVIKGWDEGVATMKKGEIAIFKIPPNLAYGDVGSPPLISPDSTLIFDIELLSWSTIKELTSDGGIMKKIIQEGEGWATPRENDEVLVKYEARLESGTLVSISDQGVEFNVSDGYLCPALSIAVKTMRKGEVAELSMKFLYGISQNSEINTKLVGCLQSGSNLATIKLELVSWKVVTDVTGDKKILKKIIKVGEGFDRPNEGSQVKVLYLCKQDDGTIIDKKGSEEEPFEFTTHEEQVHEGLERAIMTMKKGEKAMVTISSEYLCDQNALQGDTTTNKFLYYEVELVDFVKEKPFWKMDTQEKMEACERKKHDGNLLFKTENYSSACKKYEQAIRCIEFDHSFSDDEKRRANTLRLSCNLNKAACKLKLGEYSEASRLCTKVLEKDPLNVKALYRRCQAYLKTSDLEKAEADIKRALIIDPNNRDIKIEYKELKHKQKQYSRYETDIFSTMLSRMG 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0925 538 Gene3D - 27 139 IPR046357 GO:0003755
Lal8g0925 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 363 537 - -
Lal8g0925 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 259 - -
Lal8g0925 538 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 253 362 - -
Lal8g0925 538 Gene3D - 257 374 IPR046357 GO:0003755
Lal8g0925 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Lal8g0925 538 SUPERFAMILY FKBP-like 24 139 - -
Lal8g0925 538 SUPERFAMILY FKBP-like 143 221 - -
Lal8g0925 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 280 369 IPR001179 GO:0003755
Lal8g0925 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 134 IPR001179 GO:0003755
Lal8g0925 538 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 161 230 IPR001179 GO:0003755
Lal8g0925 538 Gene3D Tetratricopeptide repeat domain 375 532 IPR011990 GO:0005515
Lal8g0925 538 Gene3D - 140 256 IPR046357 GO:0003755
Lal8g0925 538 SUPERFAMILY FKBP-like 254 391 - -
Lal8g0925 538 SUPERFAMILY TPR-like 379 531 IPR011990 GO:0005515
Lal8g0925 538 Pfam Tetratricopeptide repeat 472 505 IPR001440 GO:0005515
Lal8g0925 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 284 372 IPR001179 GO:0003755
Lal8g0925 538 ProSiteProfiles TPR repeat profile. 472 505 IPR019734 GO:0005515
Lal8g0925 538 PANTHER PEPTIDYLPROLYL ISOMERASE 1 259 - -
Lal8g0925 538 PANTHER PEPTIDYLPROLYL ISOMERASE 363 537 - -
Lal8g0925 538 PANTHER PEPTIDYLPROLYL ISOMERASE 253 362 - -
Lal8g0925 538 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 165 256 IPR001179 GO:0003755
Lal8g0925 538 SMART tpr_5 472 505 IPR019734 GO:0005515
Lal8g0925 538 SMART tpr_5 389 422 IPR019734 GO:0005515
Lal8g0925 538 SMART tpr_5 438 471 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0925 Lal-Chr8 6918682 6927869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0925 10 537 Calmodulin-binding Proteins AT5G48570 51.673 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0925 - - gmx:100785412 880.937