Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0908 ATGAGAGAAGAAGATTCAAAGAGATGGGAAGAAGAATTACCTTCCCTCGATGAACTTATGCCTTTGTCCCAATCCCTAATCACTTCTCATCTCGCAATAGCCTTCCATATCACAAATACTGACAACTTTCATCGACACCTTCCAACGACACCTTCACTTCCTACAACTCACAACAACCATCATCAACAACCTTCTTCCCCTGACTCCGCCGATGAACCTGCACGGACCCTCAAAAGACCTCGTCTCGTGTGGACCCCACAGTTACACAAGCGATTCGTCGACGCCGTGGCCCACCTTGGCATCAAGAGCGCAGTGCCCAAAACTATAATGCAGTTCATGAGCGTCGATGGATTAACCAGAGAGAATGTTGCCAGCCATCTTCAGAAATACCGTCTTTATCTCAAGCGAATGCAAGGTCTTTCCGGCGGCGGTGGCGGCGGCGGTGGTGGTGTTGATGCCGCCACTGACCACTTGTTCGCCAGCTTGCCTGTTCCGCTGCATTTCTTGCAGCCGGGGATGAACAATTCGGATCATTTCTTGCCATTTGTGCAGGTTCCTGCCCTCCAGCACCACCACCACCACCAGATGGCGGTTGTGCAGCATCATCAGCCGCAGTTTCACAGGCAGGTTGGGCAATTCGGGTCGCGGCCGAATCGGCAATTTGAACATCATTTTTTGTCTAGGCAGTCTCAGCAGCAGCTTCATAGATTGGGGGCTCCATTACATAGCCCTGTGGCTGGTTATGCTGAGGATATGAGATTGGAAAATGCGTCTGGAGCGAGGAAGGTTCTTACTCTTTTTCCAACTGGAGATGAATGA 819 0.5079 MREEDSKRWEEELPSLDELMPLSQSLITSHLAIAFHITNTDNFHRHLPTTPSLPTTHNNHHQQPSSPDSADEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKSAVPKTIMQFMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGGGVDAATDHLFASLPVPLHFLQPGMNNSDHFLPFVQVPALQHHHHHQMAVVQHHQPQFHRQVGQFGSRPNRQFEHHFLSRQSQQQLHRLGAPLHSPVAGYAEDMRLENASGARKVLTLFPTGDE 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0908 272 MobiDBLite consensus disorder prediction 45 74 - -
Lal8g0908 272 SUPERFAMILY Homeodomain-like 76 136 IPR009057 -
Lal8g0908 272 MobiDBLite consensus disorder prediction 45 70 - -
Lal8g0908 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 135 IPR017930 -
Lal8g0908 272 Pfam Myb-like DNA-binding domain 83 131 IPR001005 -
Lal8g0908 272 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 1 272 - -
Lal8g0908 272 Gene3D - 76 138 - -
Lal8g0908 272 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 272 IPR044841 GO:0003700|GO:0006355
Lal8g0908 272 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 80 132 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0908 Lal-Chr8 6748075 6748893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0908 1 272 G2-like Transcription Factor Family AT3G10760 51.917 7.55e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0908 Myb_DNA-binding 4.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0908 - - jre:108983410 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0908 8 6748075 6748893 Lal10g0590 10 13579269 13581131 LSH