Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0907 ATGGCAGGCCAGAGTATTAGTGTAGTGGATTCAAATTCTCAACCTAAGATGTCTTCAAGTTCAAAATCTAAGAAGCATTCAAAGGCACATTCAAGAGCATCATCATCCACTCCTGAACCAAACACACCTTCTGAAAACGACGACGTTGAACAACTTGCTTCTTTATGCGAACATGCTTCTACTAAATTCCCTTCTTTCATTTCAAAATCAACTTTCTTCGCAAAAATCATTGATTTTGATACTTCTCATAATTCTAAGGGATGCAGAATTTGGCTTTCTGAGCCTTCTATGGTTTCTTATTCTCTTACCCCTGGTTCTATTGTTTCGTCCAAATGCGGCCCGATGTGGTTGCGTTGCGGCCCGATGCGACCATATCATTGTGATTCGGAGTCACACCGCAATTGCGGCGGTCTGGAACCACAATATTGTGGTCGCATTAGAATTTTGTCTCATGTCAAATTATTTTTGTATTCATCAATTCATGTTGCTATAGCAGTTTTTAATCTGATTCTTCACAATACTGTTGTATCAATAGCTTCTTCAGGGAGGAAAAATGTGCAATTGGATAGCTTTCCTCTCAAATCATTAGTTAATGAATGTGCCAGATGCTATGGGTTGGAAAATGGGAAGACATTGGATGATGAAGCTGGAAACTACTTTGCACTTGCAACAGTTTTTCCTTCTAGGAAGGTTTTGAAGAATGGAGTTCGACTATCTTCAAATCTTTCTTATACCATGGGATGTCCTCCTTTGGGATCAACTGTGTTTGTTCACCCAGTACAGAAACAGTATCTTTCATGTCTTTCAAATGGGGGCAGCGAACTGCATTCTACAGAAAATAATTATAATAGTCGGCTGATGATATATAATTGCAAGGAATTGCATCTTCAGTTGGTTCCTCACAAGAATGGGTTACCATTGAAAATAAAAAATTTGCCCTCATTGAACTTGTCTTCAACGAAATCCCATGTCCAATCTGAGAATGATAGTTTTGCATCTCCTAGAACACCATTTTATGGATCTAAGTTGTCTAATGCTAGTGGGTTGTCTTCTCCAATATTTGAAGATTCAGCATCAAGTGTAACCAATCAGAATAGTCAATCAATGGCTTCATTTGATGTTAGGGATGGATTAGGGGATGAAAGTAACAAAAAGTTACTAGAAACATGTGCAACTTCCTGGTTATATTCTCGTTGTTTACTGCTTGGGAATCTTGTGAATGTACCAATGCTTTCAGAAGTTTGCATTTTCCAAGTGGTAGGTGCTAAAAACATGCAAGTTGACAGATCTGATCTTTATTCATCGAATGGGAGCAATCAGTTGTACCCTGAAGATTCTGACACGGCAGAGAATGTCAATCAGGCTATTGTTGTTAATTGTGAAACAAAGGTATTCTTATCTCTGCCATCAAATGCAGTGTCTGAAGAGACAAATCAAAGTGAATTTTCTAGTGTGAAAATTAAAGACAAGGTTGCTAGTCCTAGCATACACGATAATATTTCTAAATTGGGTGGTCTATCTAAAGAATATACAGTCTTAAAGGATATAATTTCTTCATCTGTGGAAGATGCTTTATCAAGTTTTGGTTTACGAACTACAAGAGGTGTCCTTCTTCATGGTCCATCTGGCACAGGAAAGACTTCCTTGGCTCAATTATGTGCTCATGATGTTGGGGTCAATTTTTTCCCAATAAATGGACCTGAACTTGTAACACAATATTATGGGGAAAGTGAGCAAGCGTTGCATGAAGTTTTTGATTCTGCCATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAGTTAGATGCAATTGCCCCTGCAAGGAAAGATGGAGGTGAAGAGCTATCTCAAAGAATGGTTGCGACCTTGTTGAATTTGATGGATGGAGTTAGTAGAACTGAAGGGTTGCTTGTAATTGCTGCTACCAACAGGCCTGACCACATTGAGCCGGCTCTCAGACGACCTGGAAGGTTTGACAAGGAAATTGAAATTGGTGTGCCATCACCCAAACAACGATTGGATATTTTGCTCACTCTTCTTAATGAAGTGGATCACACTCTCTCCGGGTCACAAATTGAACACCTTGCCACAGTCACTCATGGTTTTGTCGGTGCTGATCTAGCTGCACTTTGTAATGAGGCGGCCTTGATTTGTCTACGACACTATGCTGATTTTAAGAAGAATTGTGACGTTTCTGATAACATAACAGAGCAACCTGTGCAACCTGCTATGATGAATGGTGCAACAGACTCACAAGACCATTCAGATTTTTCAACTTCATCTGGTTCAGATATGTCAGTGGCCTCCAATGTTGTATCAACTTCCTGCATGATAGGAATGTCTTCTGAAATTATGGAAGTAATACATGATAGTGGCAAAGAAGAGTGTACTTTGACAGTAAGTTTTGAGGATTTTCAGAAGGCTAGGATGAAAATAAGACCCAGTGCCATGAGAGAGGTAATCCTTGAGGTTCCAAAGGTTAACTGGAAAGATGTTGGTGGCCAAAAGGAGGTCAAAGCTCAACTGATGGAAGCAGTAGAGTGGCCCCAGAAGCACCATGATGCATTCGACCGTATTGGGACTCGCCCTCCAACAGGTGTATTGATGTTTGGGCCTCCGGGTTGTAGCAAAACCCTCATGGCACGTGCAGTTGCTTCGGAAGCAGGGCTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGGCAAATGCCCCATCAATTGTATTTTTTGATGAAATAGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGACGGGGTTTCCGTGTCAGACAGGGTCATGAGTCAACTTTTAGTTGAAATGGATGGTCTGCATCAAAGAGTTAATGTCACTGTCATTGCTGCTACAAATCGGCCAGACAAGATTGACCCTGCTCTTTTAAGACCAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCAAATAAAGTAGACAGAGAAGAGATATTTCGCATTCATTTGCGAAAAATCCCATGCGGTCCTGATGTTAGCATTGAAGAATTGGCTTGTCTTTCAGATGGTTGTACTGGGGCTGACATATCACTAATATGTCGGGAGGCCGCTGTTGCAGCAATTGAGGAGAGCCTTAGCGCTTCAGTTATAACAATGAAGCATTTAAAGATGGCAATTAAGCAGGTCCAGCCATCAGAAGTGCAGTCCTATCAAAAGCTGTCAGCGAAATTTCAAAGGGCTGTTCACTGCTGTGATATAAAAGATGAATTCAATCATGTGCAGCAAAAAAGTAGATCTACTTGGTTCAACATTTGGTAA 3348 0.4086 MAGQSISVVDSNSQPKMSSSSKSKKHSKAHSRASSSTPEPNTPSENDDVEQLASLCEHASTKFPSFISKSTFFAKIIDFDTSHNSKGCRIWLSEPSMVSYSLTPGSIVSSKCGPMWLRCGPMRPYHCDSESHRNCGGLEPQYCGRIRILSHVKLFLYSSIHVAIAVFNLILHNTVVSIASSGRKNVQLDSFPLKSLVNECARCYGLENGKTLDDEAGNYFALATVFPSRKVLKNGVRLSSNLSYTMGCPPLGSTVFVHPVQKQYLSCLSNGGSELHSTENNYNSRLMIYNCKELHLQLVPHKNGLPLKIKNLPSLNLSSTKSHVQSENDSFASPRTPFYGSKLSNASGLSSPIFEDSASSVTNQNSQSMASFDVRDGLGDESNKKLLETCATSWLYSRCLLLGNLVNVPMLSEVCIFQVVGAKNMQVDRSDLYSSNGSNQLYPEDSDTAENVNQAIVVNCETKVFLSLPSNAVSEETNQSEFSSVKIKDKVASPSIHDNISKLGGLSKEYTVLKDIISSSVEDALSSFGLRTTRGVLLHGPSGTGKTSLAQLCAHDVGVNFFPINGPELVTQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGVSRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRLDILLTLLNEVDHTLSGSQIEHLATVTHGFVGADLAALCNEAALICLRHYADFKKNCDVSDNITEQPVQPAMMNGATDSQDHSDFSTSSGSDMSVASNVVSTSCMIGMSSEIMEVIHDSGKEECTLTVSFEDFQKARMKIRPSAMREVILEVPKVNWKDVGGQKEVKAQLMEAVEWPQKHHDAFDRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVEMDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNKVDREEIFRIHLRKIPCGPDVSIEELACLSDGCTGADISLICREAAVAAIEESLSASVITMKHLKMAIKQVQPSEVQSYQKLSAKFQRAVHCCDIKDEFNHVQQKSRSTWFNIW 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0907 1115 Pfam AAA+ lid domain 692 724 IPR041569 -
Lal8g0907 1115 Pfam AAA+ lid domain 1021 1066 IPR041569 -
Lal8g0907 1115 Gene3D - 668 826 - -
Lal8g0907 1115 Pfam ATPase family associated with various cellular activities (AAA) 867 998 IPR003959 GO:0005524|GO:0016887
Lal8g0907 1115 Pfam ATPase family associated with various cellular activities (AAA) 536 665 IPR003959 GO:0005524|GO:0016887
Lal8g0907 1115 MobiDBLite consensus disorder prediction 1 20 - -
Lal8g0907 1115 PANTHER AAA-FAMILY ATPASE 172 1097 - -
Lal8g0907 1115 CDD AAA 530 665 - -
Lal8g0907 1115 MobiDBLite consensus disorder prediction 1 48 - -
Lal8g0907 1115 MobiDBLite consensus disorder prediction 33 48 - -
Lal8g0907 1115 CDD AAA 833 999 - -
Lal8g0907 1115 SMART AAA_5 532 668 IPR003593 -
Lal8g0907 1115 SMART AAA_5 863 1001 IPR003593 -
Lal8g0907 1115 MobiDBLite consensus disorder prediction 744 763 - -
Lal8g0907 1115 PANTHER - 172 1097 - -
Lal8g0907 1115 ProSitePatterns AAA-protein family signature. 969 987 IPR003960 GO:0005524|GO:0016887
Lal8g0907 1115 Gene3D - 827 1075 IPR027417 -
Lal8g0907 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 725 IPR027417 -
Lal8g0907 1115 Gene3D - 485 667 IPR027417 -
Lal8g0907 1115 Gene3D - 1000 1070 - -
Lal8g0907 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 825 1077 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0907 Lal-Chr8 6733024 6744538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0907 190 1111 Calmodulin-binding Proteins AT3G56690 57.265 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0907 - - gmx:100788600 1457.2