Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0902 ATGAAGTCTTTATCACTGGATCACTGGAGGAGTTACTTCCGTTCTGCGAATTCTGATATATTTGAGATAATTGACCATGCTATCATGGTGGCTGCTTCTGATTGTCCTAAAGAGTTCAGGTTGAGAAGGGATGGAATTGCAGAGAGGTTGTTCTCTTGCAAGTTGACTCGTTGCGTTGGGTGTGATATGGTGGAGTTGGCTGTGTCTGCGGATGATGCTGGTGATGAACATAATGATGATGATGATAGAGATAATGATGGTGTTGAGTTTGAGGCAGGTGCAAGCAAAGAGAGCAAGGTCAATTGTAGCAGAGAGGATCATGGAGATATGGATGTGAACCGTGTTAGCAATTTTAGCTTTGGAGATGCTGAGGCATTAACTGATGAGATTGAAGAAGAGTCTCAATATGTTGGTGAGGTTTTGAGGATTAAAGACATTCTCCTTCACCGTGAAGAACAATCTGACTCTATGTTATTTGAGTCATTGAGGAGGCTGCAGCTGATGGAACTCACTGTGGATCGTCTAAAGGCTACTGAGATTGGAAAGGCTGTCAATCCTCTACGAAAGCACGGATCGAAGGAAATTCGACAACTTGCACGAACTCTTATCGATGACTGGAAAGAATTGGTTGATGAATGGGTCAGGGCTACTACCACTACTACTGATATTGCAGCTTCAGAAGGCACTCCAGATTCAGTAAATCCATCCGTTGTTGATGATGAAGAAGAAGGACTTCCATCACCTCCTATGGATGAAGGAGCTTTCTTTGTTGCTCAAGCTGGTTCGATAGAACTTTCACAGTTCTTCGATGGCATAGATGATTATGGAAATCCTCGTCTGGGTGGACAATTCAGCGGGAACCGTGAAAATGGCAGAAAGCCATCTGTGAACAGTCACACTATAGAAAAGAGGAAATCACAAGCTTCTAACGAGACAAGGATCAATAACAAGGATAGCAAGAGTCACCAACCCAAGAAAAATGAGGTTGCTTTAAGGTTAAATAAGCATGTAACTGCAGATTCTTGCCTAGGTACACCACCAAAATCAAGCATGCAGCGAAAAAGCAATGTGGAGACGAAGATGCAGCAAAAAATAGACAACTATACTCTTGCAAAGAGGCCACCCATCGATCAGCAAGATAAATCCAAGTATTCGGACGATGTTGCTGTCCAAGTGAAGCTAGAAGCCACAAAGAGGAAACTTCAGGAACGTTATCAACAAGCTGAAAATGCCAAGAGGCAGCGTACAATACAAGTTATGGAATTAAACGAACTCCCGAAGCAAGCGGTTGTCCAGAGAAATCCACATTTCAAACCTGGAAATCACAATAGGCACTGGGGGGCTAATGCACGACGATAG 1359 0.4327 MKSLSLDHWRSYFRSANSDIFEIIDHAIMVAASDCPKEFRLRRDGIAERLFSCKLTRCVGCDMVELAVSADDAGDEHNDDDDRDNDGVEFEAGASKESKVNCSREDHGDMDVNRVSNFSFGDAEALTDEIEEESQYVGEVLRIKDILLHREEQSDSMLFESLRRLQLMELTVDRLKATEIGKAVNPLRKHGSKEIRQLARTLIDDWKELVDEWVRATTTTTDIAASEGTPDSVNPSVVDDEEEGLPSPPMDEGAFFVAQAGSIELSQFFDGIDDYGNPRLGGQFSGNRENGRKPSVNSHTIEKRKSQASNETRINNKDSKSHQPKKNEVALRLNKHVTADSCLGTPPKSSMQRKSNVETKMQQKIDNYTLAKRPPIDQQDKSKYSDDVAVQVKLEATKRKLQERYQQAENAKRQRTIQVMELNELPKQAVVQRNPHFKPGNHNRHWGANARR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0902 452 MobiDBLite consensus disorder prediction 221 252 - -
Lal8g0902 452 CDD TFIIS_I 139 211 - -
Lal8g0902 452 MobiDBLite consensus disorder prediction 279 326 - -
Lal8g0902 452 MobiDBLite consensus disorder prediction 72 106 - -
Lal8g0902 452 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Lal8g0902 452 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Lal8g0902 452 MobiDBLite consensus disorder prediction 295 326 - -
Lal8g0902 452 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 451 - -
Lal8g0902 452 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 136 219 IPR035441 -
Lal8g0902 452 MobiDBLite consensus disorder prediction 430 452 - -
Lal8g0902 452 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 4 451 IPR044805 -
Lal8g0902 452 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 224 IPR035441 -
Lal8g0902 452 MobiDBLite consensus disorder prediction 88 106 - -
Lal8g0902 452 MobiDBLite consensus disorder prediction 337 356 - -
Lal8g0902 452 SMART TFS2_5 137 212 IPR003617 GO:0005634
Lal8g0902 452 Coils Coil 391 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0902 Lal-Chr8 6676317 6680599 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lal8g0902 Med26 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0902 - - gmx:100799367 621.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0902 8 6676317 6680599 Lal10g0592 10 13607569 13611775 LSH