Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0901 ATGGCATCAAGCTCAATGTCACAATTTGGGTCATGGAGTGCTAAGGACAATAAAGCCTTTGAAAGGGCACTAGCTGTTTATGATAAGGACACCCCTGACCGTTGGTACAATGTTGCTAATGCTGTTGGTGGCAAAACTGCAGAGGAAGTGAAAAGGCACTATGATCTTCTTGTCCAAGATATCAAGTATATTGAGTCAGGGAAAGTGCCATTCCCAAAATACAAGAAAACTGGAGGCTCTCAAGATGATATCAAAAGGTTGAATAACCTAAAGTTGCAGTGA 282 0.4149 MASSSMSQFGSWSAKDNKAFERALAVYDKDTPDRWYNVANAVGGKTAEEVKRHYDLLVQDIKYIESGKVPFPKYKKTGGSQDDIKRLNNLKLQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0901 93 SMART sant 8 60 IPR001005 -
Lal8g0901 93 CDD SANT 11 54 IPR001005 -
Lal8g0901 93 SUPERFAMILY Homeodomain-like 11 64 IPR009057 -
Lal8g0901 93 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 93 - -
Lal8g0901 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 93 IPR044636 GO:0003700
Lal8g0901 93 Gene3D - 2 71 - -
Lal8g0901 93 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0901 Lal-Chr8 6647068 6648335 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal8g0901 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0901 - - gmx:100818368 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0901 8 6647068 6648335 Lal10g0594 10 13652298 13653748 LSH