Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal8g0897 | ATGCAACAACAACAGCAACAACAACAAATTGGGATGGAGAATTCTGAGTTGTTCAAATTACTAGCTGCCACTAATAGTTCCTTCTTTCACTCAACAACAACCACAATGCACCAAAAAAACTTGTGTAGTAGTTCTTCTAATAATTATAATAATTACCCATTGGAGTTATCAGAAATTACTGATGCACTCTCTCAACAGCAGGATAGAGCTCTTGCTGCTTTGAAGAACCATAAAGAGGCTGAAAAGAGAAGAAGGGAAAGAATCAATTCTCACCTCAATCAGCTTAGAACTCTTCTCCATTGTAATTCTAAGACAGATAAGGCTTCACTTCTAGCAAAGGTAGTGAAGCGAGTGAAGGAACTGAAAAAGCAAACATCTGACTTCACTGAACTCGAAACCCTTCCATCAGAAACTGACGAGATCACCATACTCTCCATCAGTGATGAAGACTACAGTGATCTCGCCGGCGATGGAAGGCTCATATTCAAGGCCTCTTTATGTTGTGAGGATCGCTCAGACCTGATCCCCGACATCATCGAAATCCTCAACTCTCTTCATCTGAAAACCCTGAAAGCAGAAATGGTCTCACTTGGTGGAAGAACACGAAACATTCTTGTTGTTGCTGCTGATAAATACCATAGCATTGAATCAATCCCATTCCTTCAGAACTCATTCAAGTCTCTGTTGGAACGTTCAAACTCTAGTGACAGATCAAAACGGCGCCGTAGGTTAAACTGA | 738 | 0.4092 | MQQQQQQQQIGMENSELFKLLAATNSSFFHSTTTTMHQKNLCSSSSNNYNNYPLELSEITDALSQQQDRALAALKNHKEAEKRRRERINSHLNQLRTLLHCNSKTDKASLLAKVVKRVKELKKQTSDFTELETLPSETDEITILSISDEDYSDLAGDGRLIFKASLCCEDRSDLIPDIIEILNSLHLKTLKAEMVSLGGRTRNILVVAADKYHSIESIPFLQNSFKSLLERSNSSDRSKRRRRLN | 245 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal8g0897 | 245 | Coils | Coil | 63 | 83 | - | - | |
Lal8g0897 | 245 | CDD | bHLH_AtAIG1_like | 67 | 143 | - | - | |
Lal8g0897 | 245 | Pfam | Helix-loop-helix DNA-binding domain | 76 | 121 | IPR011598 | GO:0046983 | |
Lal8g0897 | 245 | PANTHER | TRANSCRIPTION FACTOR BHLH106-RELATED | 28 | 243 | - | - | |
Lal8g0897 | 245 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 76 | 130 | IPR036638 | GO:0046983 | |
Lal8g0897 | 245 | Gene3D | - | 66 | 132 | IPR036638 | GO:0046983 | |
Lal8g0897 | 245 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 72 | 121 | IPR011598 | GO:0046983 | |
Lal8g0897 | 245 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 28 | 243 | IPR045847 | GO:0003700|GO:0006355 | |
Lal8g0897 | 245 | SMART | finulus | 78 | 127 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal8g0897 | Lal-Chr8 | 6589962 | 6591531 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal8g0897 | 34 | 235 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G41130 | 62.927 | 2.08e-76 | 230 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Lal8g0897 | HLH | 1.4e-09 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal8g0897 | - | K22484 | gmx:100802566 | 294.664 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal8g0897 | 8 | 6589962 | 6591531 | Lal10g0608 | 10 | 13833644 | 13835615 | LSH |