Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0894 ATGGGCCTGTGTCATGGAAAACCAATTGAAACTTCACAAACTCAAAGAGAAAACCAATCATTCCAAAATGATAAAGAGGTTGTTGTTTTACCACTTCCACCAAGATCCTCATCAAAATTCCCCTTTTACAGTCCAAGCCCTTTGCGTAAATTCTTCAAGAACTCACCTTCAAACTCCACTCCCTCTAGTGTGAGCTCAACCCCTCTGCGCCTCTTCAAGAGGCCTTTCCCTCCTCCTTCACCAGCAAAGCACATAAGGGCATTGCTCGCGAGGCGCCACGGTTCGGTGAAGCCTAATGAGGCCACAATCCCTGAAGGGAGTGAATGTGAGGTTGGTTTGGACAAGAGTTTTGGTTTCTCTAAGCAGTTTGAGGTTCATTATGAGCTTGGAGAAGAAATTGGGCGTGGCCATTTTGGATACACTTGCTCTGCAAAGGGAAAGAAGGGAAGCTTGAAGGGCCAGGAAGTTGCTGTCAAAGTCATTCCAAAATCCAAGATGACAACAGCAATCGCTATAGAGGATGTAAGGAGAGAAGTTAAGATATTGCGAGCTCTAACTGGGCATAAGAATTTGGTGCAATTCTATGAAGCTTATGAGGATGACAACAATGTTCATATAGTTATGGAGCTATGCAAAGGAGGTGAACTTCTGGATAAGATCCTTTCCAGGGGTGGAAAGTACCCAGAGGAGGATGCCAAGGATGTTATGATTCAGATATTAAATGCGGTAGCTTTCTGTCATCTACAGGGTGTTGTTCACCGTGATCTGAAGCCAGAGAATTTTCTTTTTACTTCTAAGGATGACAATTCCACTCTGAAGGCCATTGATTTTGGACTGTCTGACTATGTAAAACCAGATGAAAGGTTGAACGATATTGTAGGAAGTGCATATTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGAACGGAAGCGGATATGTGGAGCATTGGTGTAATTGCCTATATTCTTTTATGTGGAAGCCGACCCTTCTGGGCCCGGACAGAATCTGGCATATTTCGTGCTGTTTTGAAGACAGATCCAAGTTTTGATGAAGGCCCTTGGCCTTCTTTATCAGCTAATGCTATTGATTTTGTGAAGAGACTGTTGAACAAGGATTATCGTAAAAGACTAACTGCAGCTCAGGCTCTCAGTCATCCATGGCTGGCAAATCATTCTGATGATATAAGGATACCCTTTGATATGATAATCCCCAAGCTTATTAAAGCTTACATATGCTCATCTCCTTTATGCAAAACAGCATTAGGGGCTCTTGCAAAGACATTAACGTTAGTGCAGCTAGCTTATCTCAAGGAACAATTTACTCTTTTGGGACCAAACAAAAGTGGGTTAATCTCTATGCAGAACTTCAAGATGGCTGTTTTAAGGAGTGCAACGGATGCCTCAAAGGAATCACGGGTCTTGGATTATGTAAACACGTTTAGTTCAATCCAATATCGGAAATTGGACTTCGAGGAATTTTGTGCTGCTGCGATAAGTGTGCATCAACTAGAGGGAATGGAGAGCTGGGAGCAACATGCAAGGAATGCCTATGAGCTGTTTGAAAAGGATGGAAATAGACCAATCATGGTTGAAGAGCTTGCCTCGGAACTTGGGCTTAGTCCATCGGTGCCTGTTCATGTGGTACTCCAAGATTGGATACGACACTCGGACGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCACGGAGTTTCTTCGCGCACACTTCAGAAGGCTTGA 1746 0.4347 MGLCHGKPIETSQTQRENQSFQNDKEVVVLPLPPRSSSKFPFYSPSPLRKFFKNSPSNSTPSSVSSTPLRLFKRPFPPPSPAKHIRALLARRHGSVKPNEATIPEGSECEVGLDKSFGFSKQFEVHYELGEEIGRGHFGYTCSAKGKKGSLKGQEVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDNNVHIVMELCKGGELLDKILSRGGKYPEEDAKDVMIQILNAVAFCHLQGVVHRDLKPENFLFTSKDDNSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRAVLKTDPSFDEGPWPSLSANAIDFVKRLLNKDYRKRLTAAQALSHPWLANHSDDIRIPFDMIIPKLIKAYICSSPLCKTALGALAKTLTLVQLAYLKEQFTLLGPNKSGLISMQNFKMAVLRSATDASKESRVLDYVNTFSSIQYRKLDFEEFCAAAISVHQLEGMESWEQHARNAYELFEKDGNRPIMVEELASELGLSPSVPVHVVLQDWIRHSDGKLSFLGFVRLLHGVSSRTLQKA 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0894 581 SUPERFAMILY EF-hand 421 572 IPR011992 -
Lal8g0894 581 Gene3D Phosphorylase Kinase; domain 1 120 216 - -
Lal8g0894 581 Pfam Protein kinase domain 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0894 581 SMART serkin_6 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0894 581 SUPERFAMILY Protein kinase-like (PK-like) 126 415 IPR011009 -
Lal8g0894 581 MobiDBLite consensus disorder prediction 1 25 - -
Lal8g0894 581 MobiDBLite consensus disorder prediction 51 71 - -
Lal8g0894 581 CDD STKc_CAMK 126 388 - -
Lal8g0894 581 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 576 - -
Lal8g0894 581 PANTHER CDPK-RELATED KINASE 1 28 576 - -
Lal8g0894 581 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Lal8g0894 581 ProSiteProfiles Protein kinase domain profile. 127 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0894 581 Gene3D Transferase(Phosphotransferase) domain 1 217 402 - -
Lal8g0894 581 MobiDBLite consensus disorder prediction 51 69 - -
Lal8g0894 581 MobiDBLite consensus disorder prediction 8 25 - -
Lal8g0894 581 Gene3D - 409 572 - -
Lal8g0894 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0894 Lal-Chr8 6550138 6556310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0894 1 579 EF-hand Containing Proteins AT3G50530 66.719 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal8g0894 Pkinase 3.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0894 - - gmx:100796678 979.933