Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0887 ATGGGTAGCAGAACTAGAAAGATTAACGTTAACAAAACTGAAGATACTAACAACGTTGTCATCAAGATGCCAAGCTATGCACCTTCATTGCCTTCTTCTAATTCCATTACGTTTACCACAATTGCGGGAAAACATGGTCGTAATGCTGTTGAGGAAACTCACGAAACCACAATATTCCAGCTGCAATTGCAGTTGAGGCGGGGCAATGAAGCAAATAATGTTCATCCTTCTCGAATTTCTGAATTTGGTGCTCTTGAGCAATCTCTTGGATTTCATGTTGACGATGCCATCAATCTTAGCAGAAATCCAGTGTTTAGTCAGATGAAATCAAATAGCCAAGCTCTAGGTGCTGATGTTCAATTTGGTGCTTTGAATAAGATACAGTCATCTGCTACCCCGGATATTGACCTCCGTGCAGCAATTGCTGGGACCCAGACATTGCCACTGCAAATAGACCCCCAACCAAACCTGACTCCGATGTCTGGTGGTCATCGTGAGAACTGGGGAGAGTCAAACATGGCAGATGCAAGCGCTGATACTTCAACCGATGATACAGATGATAAAAATCAAAGGGCTGAAAGAGGTGAATCCAGTGATAGATCGAAAGATAAATCAGATCAGAAGACACTACGACGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGACTGAGGAAAAAGGCATATGTGCAACAATTAGAGAGTAGTAGGCTGAAACTTACCCAACTTGAGCAGGAACTCCAGCGAGCCCGCCAGCAGGGAATATTTATTTCAAGCACAGAAGATCAGCCCCATTCAATGAGCGTAAATGGTGCTATGGCATTTGACGTAGAATATGCACGATGGTTAGAAGAGCATAATAGGCACACCAATGAGCTAAGGGCTGCAATAAATTCGCATGCTGGAGACATTGAACTTCGAACCATTGTCGACAACTTCATGACACAATTTGATGATATCTTCAGGCTGAAAGGTGTTGCAGCTAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGATGTTTCATGTGGATTGGAGGTTTTCGTTCATCCGAGCTCCTCAAGCTTCTTGTAAATGAATTGGAGCCTTTAACTGAGCAACAAGTGATGGGCATATATAACTTGCAGCAGTCATCCCAGGAAGCAGAAGATGCTTTGTCCCAAGGAATGGATGCATTGCAGCAATCACTAGCCGAGACATTGGCAAATGGTTCACCCAACTCTTCAGCCTCTTCCGGGAATGTGGCAAATTATATGGGACAAATGGCTGTGGCCATGGGTAAACTTGGTAGTCTCGAGGGCTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCCCGAGCTCTCCTCGCAATTAGCGATTACTTCTCCCGGCTGCGAGCCCTAAGCTCTCTATGGCTTGCCAGGCCAAGGGAGTAA 1482 0.4507 MGSRTRKINVNKTEDTNNVVIKMPSYAPSLPSSNSITFTTIAGKHGRNAVEETHETTIFQLQLQLRRGNEANNVHPSRISEFGALEQSLGFHVDDAINLSRNPVFSQMKSNSQALGADVQFGALNKIQSSATPDIDLRAAIAGTQTLPLQIDPQPNLTPMSGGHRENWGESNMADASADTSTDDTDDKNQRAERGESSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTEDQPHSMSVNGAMAFDVEYARWLEEHNRHTNELRAAINSHAGDIELRTIVDNFMTQFDDIFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNELEPLTEQQVMGIYNLQQSSQEAEDALSQGMDALQQSLAETLANGSPNSSASSGNVANYMGQMAVAMGKLGSLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0887 493 MobiDBLite consensus disorder prediction 146 210 - -
Lal8g0887 493 PANTHER TGACG-SEQUENCE-SPECIFIC DNA-BINDING PROTEIN TGA-2.1 94 493 - -
Lal8g0887 493 Gene3D - 207 260 - -
Lal8g0887 493 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 211 226 IPR004827 GO:0003700|GO:0006355
Lal8g0887 493 SUPERFAMILY Leucine zipper domain 208 251 IPR046347 GO:0003700|GO:0006355
Lal8g0887 493 SMART brlzneu 204 267 IPR004827 GO:0003700|GO:0006355
Lal8g0887 493 Pfam Seed dormancy control 290 365 IPR025422 GO:0006351|GO:0043565
Lal8g0887 493 ProSiteProfiles DOG1 domain profile. 273 490 IPR025422 GO:0006351|GO:0043565
Lal8g0887 493 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 206 250 IPR004827 GO:0003700|GO:0006355
Lal8g0887 493 MobiDBLite consensus disorder prediction 147 161 - -
Lal8g0887 493 Coils Coil 227 254 - -
Lal8g0887 493 PANTHER TRANSCRIPTION FACTOR TGA9 94 493 - -
Lal8g0887 493 MobiDBLite consensus disorder prediction 181 210 - -
Lal8g0887 493 CDD bZIP_HBP1b-like 208 260 - -
Lal8g0887 493 Pfam Basic region leucine zipper 204 250 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0887 Lal-Chr8 6487686 6493609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0887 173 493 bZIP Transcription Factor Family AT3G12250 73.716 1.85e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal8g0887 DOG1 5.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0887 K14431 - gmx:778136 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0887 8 6487686 6493609 Lal10g0619 10 13966162 13972669 LSH