Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0875 ATGGCAGATGATCAATTTCAAGCTAGTGGGAACTGGTGGGATTCAGCTAGGAACTTGAGATTTGAAAGTGGAGAATCACAGTCTTCATCTTCTTGCATCACTAACATAGGTAACTTTACTTGGCAACAACAAGATATGGCAGATACTACTCAGAAGATTCAACCTCAAAATCATCATTCTGCCACTTCAAGTGACCCCAACATGCATATGATGGGTTTAGGCCTTTCATCTCAAGCAATGGATTGGAATCAAACATCATTGTTAGGTGAGAAAGCTGCAGAGAACAGTTTCAGGTCCATGCTACAAGAGAATATGAGCTCAACAAGAACAAATATTCAACAAGAAAGTGGGGTGGGGTTGTCTCAACAAGTTCAATATAAGTCAGAAAAGCTGTTCACTGAAGAGTATTCAACCAATGAATTCAAGCCAGTGAATAAGGGTTTCTCTATGGATCAAAACCAGTTTACACCTCAATATAGCACTAGGGACAGAAACCAAACAAGCCAAGCTGGTTTGCACTCAACTTTTCAGGTTGATTCCTCAGCTTTATATGGAACTGCACCATCATCAATATTACAAGGAGTACTGTTGGGACCTGACAATAATAACAGCCCCATGAATTTTCCATACCCTAAAAGTTATGGATCTAACTCTTCTAATCATGAGTTAGTGCCTTCTTGGTCTAAAGTTCCTCAGTTCTTGAGAGCTTCATCTCCACCAAAACAACCACCGTGTAGCTTCTTTCCACCATTACAAACCCCATTCTCTATGCCAAATTTTGATGTACAATCAAAGAATATATCTGAAGTAAGGGACTCAGGTGCTGTGGTAAAGAAAAGTGGGAATGAGTCAGCATCCAAAAGACCCAGGAACGAAACCTCATCTTCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGAGACAGAGTCAGTGCACTCCAACAATTAGTGTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTATCTGAAGCCATTGAATTCATCAAATTCCTTCATGAACAAGTCAATGTTTTAAGTGCCCCGTATATGAAAAGTGGAGCTCCAATACAGATTCAACAGAGTTGTGATAAATTTAAAGAAGAAGATGGTCCAAAACAGGATCTTAGAAGTCGAGGGCTGTGTTTGGTGCCAGCTTCTAGTACATTTCCAATGACTCATGGTACAATTGATTTCTGGACTTCAACATTTGGAGGGACTTCAAGATAA 1233 0.4015 MADDQFQASGNWWDSARNLRFESGESQSSSSCITNIGNFTWQQQDMADTTQKIQPQNHHSATSSDPNMHMMGLGLSSQAMDWNQTSLLGEKAAENSFRSMLQENMSSTRTNIQQESGVGLSQQVQYKSEKLFTEEYSTNEFKPVNKGFSMDQNQFTPQYSTRDRNQTSQAGLHSTFQVDSSALYGTAPSSILQGVLLGPDNNNSPMNFPYPKSYGSNSSNHELVPSWSKVPQFLRASSPPKQPPCSFFPPLQTPFSMPNFDVQSKNISEVRDSGAVVKKSGNESASKRPRNETSSSLPAFKVRKEKMGDRVSALQQLVSPFGKTDTASVLSEAIEFIKFLHEQVNVLSAPYMKSGAPIQIQQSCDKFKEEDGPKQDLRSRGLCLVPASSTFPMTHGTIDFWTSTFGGTSR 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0875 410 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 301 356 IPR036638 GO:0046983
Lal8g0875 410 MobiDBLite consensus disorder prediction 271 299 - -
Lal8g0875 410 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 246 399 - -
Lal8g0875 410 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 8 244 - -
Lal8g0875 410 Gene3D - 301 362 IPR036638 GO:0046983
Lal8g0875 410 CDD bHLH_AtbHLH_like 297 348 IPR045239 -
Lal8g0875 410 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 291 340 IPR011598 GO:0046983
Lal8g0875 410 MobiDBLite consensus disorder prediction 48 67 - -
Lal8g0875 410 MobiDBLite consensus disorder prediction 143 169 - -
Lal8g0875 410 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 244 - -
Lal8g0875 410 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 246 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0875 Lal-Chr8 6367631 6373742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0875 247 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 65.680 1.72e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0875 - - lang:109357749 734.176