Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0873 ATGGACTCACAGCAGATTTTCAGTTACAATTTGACAAGTGCAGGACTACCTTACATGTCATATTTTCCCACTATTCCATCACTACCCAACAGTTTTGGATCCTTGAATTTTGATATCGGGAACTCGCCTAATTCGCCGCTTTCCACTTATTTTGATTCTGATACACTTTCTGCATTGAGTGGCAGCCCCGAGCAGCAGCGCAGCCCCTCGGGAATCCTCTCGGGTGTAAGCCTGTCTTGTAACTCTTCACTCGAAACCAATCGTTATATGCAGACGCCAATCTCATCAGTGGACAGTATCAAAGACAGTTTGCAACTATATTCTGCTAGGAGCTCTCTCCTACAGAATGCAAATTGGAATCAGAAAGTCCAACACGCATTGTTGGAACTCGAAAACGCTCTGATGGCCCCTGATGATGATGTAGTTACCACATCAAATACTTCTTTGGCTGATTGCGGGAGGACAACGACATCTCTTGAAAGACATAGGCCTTGGAGCCACGAGCACCAGGGGTCACAATATATTCAAACTCAGCCATCTTATGTAACTAGCTGTAGGCAATCAAGTGATGTTGAACATTCAGCGAAACGACAAAAAACGATGGAGGAATTACAGCTGCAAGGGTTCCCATCAAGCAACTTGAAACAACTGCTGATTGCTTGTGCCAAAGCCCTGTCTGAAAACAACATGAGAGGCTTTGATCAATTGATAGTAAAGGCTAGAAGTGCTGTGTCTATTAGTGGGGAGCCGATCCAAAGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGACGGAAGCATCGGGGAGTAGCATCTATCGCGCCCTTAGGTGCAAAGAGCCTGAAGGCGAAGAATTACTATCTTACATGCAAATTTTGTTTGAAATCTGCCCGTACTTAAAATTCGGTTACATGGCTGCCAATGGTGCTATTGCTGAAGCATGCAGAAACGAGGATCGAATTCACATCGTAGACTTTCAGATTGCTCAGGGAACTCAGTGGATGACTCTTCTTCAGGCTCTTGCAGCAAGACCTGGTGGAGCTCCCCATGTGAGGATCACAGGGATCGACGACCCTGTGTCTAAATATGCTCGTGGCGATGGACTAGAGGTAGTTGGGAAAAGGTTGGCCGCGATGTCAAAGAAATTTGGGATTCCGGTCGAGTTTCATGGAGTGCCTGTTTTTGCTCCAGATATAACAAGAGATATGCTTGATATCAGACCTGGAGAGGCTTTGGCTGTGAACTTTCCCTTGCAACTCCATCACACTGCTGATGAGAGTGTTGATTTGAGTAACCCAAGGGATGGACTTTTGAGATTAGTCAAATCACTTTCTCCGAAGGTTACCACATTGGTAGAGCAGGAAGCGAACACGAATACCACTCATTTCTTCAACAGGTTTATAGAAACCTTAGATTACTATTTGGCGATCTTTGAATCCATCGATGTCACTCTCCCGAGAAGTAGCAAAGAGCGGATTAATGTGGAGCAACATTGTCTCGCTCGCGATATTGTGAACATTATTGCTTGTGAAGGGAAGGAAAGACTCGAGAGGCATGAACTGTTCGGGAAGTGGAAGTCTAGGTTGACAATGGCCGGCTTCCGTCAATCTCCATTAAGCTCTTACGTGAATTCTGTTATAAGAAGCCTCTTGGGTTGCTATTCAGAACATTATACACTAGTGGAGAAGGATGGGGCCATGTTGTTGGGGTGGAAGAACAGAAATTTGATATCAGCTTCAGCCTGGTATTAA 1755 0.4519 MDSQQIFSYNLTSAGLPYMSYFPTIPSLPNSFGSLNFDIGNSPNSPLSTYFDSDTLSALSGSPEQQRSPSGILSGVSLSCNSSLETNRYMQTPISSVDSIKDSLQLYSARSSLLQNANWNQKVQHALLELENALMAPDDDVVTTSNTSLADCGRTTTSLERHRPWSHEHQGSQYIQTQPSYVTSCRQSSDVEHSAKRQKTMEELQLQGFPSSNLKQLLIACAKALSENNMRGFDQLIVKARSAVSISGEPIQRLGAYMVEGLVARTEASGSSIYRALRCKEPEGEELLSYMQILFEICPYLKFGYMAANGAIAEACRNEDRIHIVDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEVVGKRLAAMSKKFGIPVEFHGVPVFAPDITRDMLDIRPGEALAVNFPLQLHHTADESVDLSNPRDGLLRLVKSLSPKVTTLVEQEANTNTTHFFNRFIETLDYYLAIFESIDVTLPRSSKERINVEQHCLARDIVNIIACEGKERLERHELFGKWKSRLTMAGFRQSPLSSYVNSVIRSLLGCYSEHYTLVEKDGAMLLGWKNRNLISASAWY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0873 584 Pfam GRAS domain family 214 583 IPR005202 -
Lal8g0873 584 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Lal8g0873 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 584 IPR005202 -
Lal8g0873 584 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 27 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0873 Lal-Chr8 6352159 6353913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0873 206 583 GRAS Transcription Factor Family AT5G48150 62.797 2.91e-174 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal8g0873 GRAS 6.7e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0873 - - adu:107462432 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0873 8 6352159 6353913 Lal2g0539 2 3246987 3250618 PCT
Lal2g0539 2 3246987 3250618 Lal8g0873 8 6352159 6353913 PCT