Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0868 ATGGTGGGAACTCCAATTACTCCAATTAATGGAAGAACAAGGCCAACTTTTGCTGTTGTAAATGGTGGCCATTATCTTAGTCCCAATAGTGCTCCACCTAGTAATGCTGGCTCAGATTATGGTGGAATCATAGAGTTCACAAGAGAGGATGTGGAAGCCTTGCTGAAAGAGAAATCCAAAAGGAAAGACAGATTTAATTATAAGGAAAGATGTGAAAATATGATAGATTATATAAAAAGGCTTAAGGTTTGTATCAGATGGTTCCAAGACCTTGAACTAAACTACTCACTAGAGCAAGAAAGACTAAAGAATTCATTAGAGTTAGCCCAGCAAAAATGCATGGAAATAGAGTTGCTGCTCAAAATCAAGGAAGAAGAACTTAATTCTATTATTGTTGAAATGAGGAGGAATTGCACTTCTTTGCAAGAGAAATTGATAAAGGAAGAAACGGAGAAAATGGTGGCAGTGGAATGTCTTGTTAAAGAGAGAGATGCTAGGCTTAACTATGAGAGAACACAGTCTACACTAGAGGAGGATCTTGGGAGAGCTCAACGAGAGCTCCAAAGTGCAAATGAGAAGATATCATCACTCAATGACATGTATAAGCGATTACAAGATTACGTAACAGGGTTACAGCAGTACAACGGAAAACTTCATTCAGAGCTTTCTACAGTTGAAGATGAACTAAAGCGCATAGAGAAAGAGAAGGCTACTGTAGTGGAAAGCCTCACCATGTTAAAAGGCCAGCTTACTTTGTCTATGGCTTCGCAAGTAGAAGCCACAAAACTGAAGGACGCTTTGACTAGTGAAGTTGCATCTCTTAGAGTAGAGTTGCAACAAGTAAGAGATGATCGGGTTTTCCAAATGTCTCAAGTGCAAACTTTAACTTCTGAATTAGTAAAATTTAAAGATTCTACAGAAAAGTCTAGCTCTGAGGTGGACAACTTGACCACGAAAACAAATGAACTAGAGGCAAAATGTAATTTGCAAGATAACCAGATAAAGGCATTACAAGAGCAGCTTGAAAATGCAGAGAAGAAATTGGAGGTTTCTGATGTATCTGTAATCGAGACAAGAACAGAATTTGAAGGACAGAAAAAATTTGTGAAAGATTTAGAAAGACGCTTGGCAGATGCAGAGTATAAAGTTATAGAAGGGGAGAAATTGCGGAAAGAATTACATAATACCATTTTGGAGCTAAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGACCTTTATTACCTGATGAAGGTTGTCACACAGATGGCAAGATTATATCTTATCCCACATCAATGGAAGCTGCTGGACGAGGCATTGAATTGACCCATAATGGCCAAAAGCATGCTTTTACATTTGATAAAGTTTTTGCGCCTGATGCATCACAAGAAGACGTTGTCATGGAAATTTCACAGCTTGTGCAGAGTGCTCTTGATGGTTATAAGGTTTGCATTTTTGCATATGGTCAGACAGGGTCGGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCAGAGGAGAAGGGCTTGATTCCGCGCTCACTCGAACAAATATTTCAAACAAGACAGTCTCAGCATCCTCAAGGCTGGAAATATGAAATGCAGGTCTCGATGTTGGAAATATACAATGAGACCATCCGCGATCTATTATCTACAAATAAATCACCATCAGATGCAACACGACAAGAAAATGCTACTCCTGGAAAACAATATACAATCAAACATGATGCAAGTGGAAATGCACATGTTACCGATCTTACAGTAGTGGATGTTCAGAGTGTAGAAGAGGTTGCATTTCTTCTGAATCGAGCTGCAAACAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCTTCAAGAAGTCATTTTGTATTTACTCTTCGAATATACGGTGTAAATGAGAGCACTCATCAACAAGTAGAAGGTATTTTGAATCTAATTGATCTTGCTGGAAGTGAGCGTCTTTCAAAAAGTGGTTCAACCGGGGACCGACTGAAGGAAACTCAGGCTATCAATAAAAGTTTGTCGTCATTAAGTGATGTCATATTTGCCTTGGCCAAGAAGGAGGATTATGTGCCATTCAGGAACTCGAAGCTTACATATCTACTTCAGCCTTGTCTAGGTGGGGACTCTAAGACATTAATGTTTGTGAACATTTCTCCTGACCAATCTTCGGCTGCCGAGTCACTATGCTCACTCCGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACAGCGCGGCGTAACACCTATGGACGTTCCAGAGAATCATCGTCTCGCTTGAGCTACTACTAA 2301 0.4011 MVGTPITPINGRTRPTFAVVNGGHYLSPNSAPPSNAGSDYGGIIEFTREDVEALLKEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELNYSLEQERLKNSLELAQQKCMEIELLLKIKEEELNSIIVEMRRNCTSLQEKLIKEETEKMVAVECLVKERDARLNYERTQSTLEEDLGRAQRELQSANEKISSLNDMYKRLQDYVTGLQQYNGKLHSELSTVEDELKRIEKEKATVVESLTMLKGQLTLSMASQVEATKLKDALTSEVASLRVELQQVRDDRVFQMSQVQTLTSELVKFKDSTEKSSSEVDNLTTKTNELEAKCNLQDNQIKALQEQLENAEKKLEVSDVSVIETRTEFEGQKKFVKDLERRLADAEYKVIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCHTDGKIISYPTSMEAAGRGIELTHNGQKHAFTFDKVFAPDASQEDVVMEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTRQSQHPQGWKYEMQVSMLEIYNETIRDLLSTNKSPSDATRQENATPGKQYTIKHDASGNAHVTDLTVVDVQSVEEVAFLLNRAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTHQQVEGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDYVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSAAESLCSLRFASRVNACEIGTARRNTYGRSRESSSRLSYY 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0868 766 Coils Coil 313 354 - -
Lal8g0868 766 SUPERFAMILY Tropomyosin 215 396 - -
Lal8g0868 766 Coils Coil 99 151 - -
Lal8g0868 766 PRINTS Kinesin heavy chain signature 479 500 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 PRINTS Kinesin heavy chain signature 613 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 PRINTS Kinesin heavy chain signature 644 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 PRINTS Kinesin heavy chain signature 693 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 Coils Coil 264 284 - -
Lal8g0868 766 Pfam Kinesin motor domain 409 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 Coils Coil 369 389 - -
Lal8g0868 766 Coils Coil 215 242 - -
Lal8g0868 766 Coils Coil 166 207 - -
Lal8g0868 766 CDD KISc_C_terminal 401 745 - -
Lal8g0868 766 MobiDBLite consensus disorder prediction 552 572 - -
Lal8g0868 766 ProSiteProfiles Kinesin motor domain profile. 403 743 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 SMART kinesin_4 401 751 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal8g0868 766 Gene3D - 258 402 - -
Lal8g0868 766 Gene3D Kinesin motor domain 403 764 IPR036961 -
Lal8g0868 766 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 765 - -
Lal8g0868 766 PANTHER KINESIN-LIKE PROTEIN 10 765 - -
Lal8g0868 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 741 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0868 Lal-Chr8 6305841 6312859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0868 331 740 Calmodulin-binding Proteins AT5G65930 37.471 3.10e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0868 K10405 - gmx:100814696 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0645 10 14286143 14294996 Lal8g0868 8 6305841 6312859 LSH
Lal8g0868 8 6305841 6312859 Lal1g0541 1 3471433 3477381 PCT
Lal8g0868 8 6305841 6312859 Lal9g0471 9 3126849 3132363 PCT
Lal1g0541 1 3471433 3477381 Lal8g0868 8 6305841 6312859 PCT
Lal9g0471 9 3126849 3132363 Lal8g0868 8 6305841 6312859 PCT