Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0851 ATGACTAGCATCATTTTAAGGTCTAATGAAGTAATTCATGCATTGAGCTTGTTCTTGATCTTGCTTTTAGTGCACAAGAGTGATGCCTATGAATTTGTAGTTGGGGGCCAAAAGGGTTGGAGTGTTCCAAATGACCCTAACTCCAACCCTTATAATCAATGGGCAGAAAATAGCAGGTTTCAAATAGGAGACTCCCTAGTGTTCAATTATCCATCTGGGCAAGACTCAGTTTTACAAGTGAATAGCAAGGACTTTGGCAATTGTAACACTAATGTGTATTCTAAAAAATTCTCTGATGGCCACACAGTCATCAAACTTGACCAATCAGGAGCACACTTCTTCATAAGTGGAAACAAAAACAACTGTCTGAAGAATGAGAAGCTGGTGGTGGTTGTGCTGGCTGATAGAAGCAACAGAATCTCAAGCACCAACCAAACAATCACCACTCCTTCTCCTTCTCCTTCACCTTTACCCTCAGTATCACAAGAGCCATTAGCTCCAACACCAGCACCTACTCAGCAAGTGCTTCCATCTCCACCAGCAGGAACTGTGGGGATTTCACCACCTTATCTGCAACAGGCTCCATCTCCAACAACAGGGACTGTGGTAACAAACCCAACTCCAGCTCCAGTCAGTGAACCTACTCCTCCTAATGCTGCTTCTTCAATCTTGGTTGATTGA 681 0.4347 MTSIILRSNEVIHALSLFLILLLVHKSDAYEFVVGGQKGWSVPNDPNSNPYNQWAENSRFQIGDSLVFNYPSGQDSVLQVNSKDFGNCNTNVYSKKFSDGHTVIKLDQSGAHFFISGNKNNCLKNEKLVVVVLADRSNRISSTNQTITTPSPSPSPLPSVSQEPLAPTPAPTQQVLPSPPAGTVGISPPYLQQAPSPTTGTVVTNPTPAPVSEPTPPNAASSILVD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0851 226 MobiDBLite consensus disorder prediction 151 176 - -
Lal8g0851 226 CDD OsENODL1_like 30 133 IPR041846 -
Lal8g0851 226 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Lal8g0851 226 Gene3D - 30 146 IPR008972 -
Lal8g0851 226 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Lal8g0851 226 MobiDBLite consensus disorder prediction 142 226 - -
Lal8g0851 226 MobiDBLite consensus disorder prediction 189 208 - -
Lal8g0851 226 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Lal8g0851 226 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 6 157 - -
Lal8g0851 226 PANTHER BLUE COPPER PROTEIN 6 157 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0851 Lal-Chr8 6173734 6178147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0851 11 223 Phytocyanin Superfamily AT3G20570 41.589 4.85e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0851 - - gmx:100788637 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0851 8 6173734 6178147 Lal10g0761 10 15309532 15313287 LSH
Lal8g0851 8 6173734 6178147 Lal21g0252 21 1656702 1661389 PCT
Lal8g0851 8 6173734 6178147 Lal4g0158 4 984112 988655 PCT
Lal21g0252 21 1656702 1661389 Lal8g0851 8 6173734 6178147 PCT
Lal4g0158 4 984112 988655 Lal8g0851 8 6173734 6178147 PCT
Lal2g0475 2 2876379 2877307 Lal8g0851 8 6173734 6178147 PCT