Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0830 ATGAGGAGCTCCGTCAATTTTGATTTTGTCATAACTGTGTCCTCTCTCTTAATAGCGGGAACCCGAAAACTCCATTCTCTTCATACCTCTCACTCTTCTTTCTCCCCTAGGCTTCGCAACTCGAACAAAGCAACTATGATTTTTCACAAGGGCTCAAAGGTTTGGGTTCAGGACAAGGATTTAGTTTGGGTGGATGCTGAAGTTATCGGTTCTTCTAGTAACGGCATCATCCACCTCATAACCGTTTCCGGCAAGACGGTTGTTTCTTCACCGGAGGAATTGTTGGCGAGGGACGCCGACGAAGATGAGCATGGTGGAGTTGAAGATATGACTAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTTCGTAGAAGATACGTGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCCTTCACGAACCTTCCTCATTTGTATAATACCCATATGATGGAGCAATATAAGGGAGCGCCACTTGGTGAGCTTAGCCCTCATGTTTTTGCTGTCGCTGATGCATCTTATAGAGCAATGATGAATGAAGGTAAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGCGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTATGTTGGTGGACGTGCTGCTGGCGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCGCTTTTAGAGGCATTTGGTAATGCAAGGACTGTCAGGAATGATAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGAAGAATATCTGGTGCTGCAATTCGAACTTACTTACTGGAAAGATCACGAGTAGTTCAGATAACGGATCCGGAAAGAAATTATCACTGCTTTTATCAATTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAAGTTAGCACATCCTAGCCACTTCCACTATTTAAATCAAAGTAAAGTCTATGAACTAGATGGTGTAAGAAATTCTGAAGAATATGTGAATACGAGGAGGGCAATGCATGTTGTGGGCATAAGTAATGAGGACCAGGAAGCCATATTTCGTGTTTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGATTCATCAGTGATAAAAGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTAATCTTTTCATGTGTGATGTAGACCTACTACTAGCAACATTGTCTACTCGTTCCATACAAACCCGAGAAGGATGTATTATCAAAGCCCTTGATTGCAATGCTGCTGTTGCTGGTCGGGATGTTTTGGCAAAAACTGTTTATGCTCGCTTATTTGATTGGCTTGTTGATAAGATCAATAGGTCTGTTGGGCAAGATATTAATTCTCAGATGCAAATTGGAGTTTTGGATATTTATGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAATTCTGCATCAATTTTGCGAATGAAAAGCTCCAGCAACATTTTAATGAGCATGTATTCAAGATGGAGCAGGAGGAGTACAGTAAAGAAGAAATTAACTGGAGTTACATTGAGTTTGTAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTCTGTTGGATGAAGCCTGGTTGGAAAAGGAAAAGTTCTCACAGACAGATTTTACCATGTCTCATTATGCTGGAAAGATTTTAAGGAGGCTGGCTGCTTTTATGCAGGTTACTTATCATACAGATACATTCTTAGACAAAAACCGTGATTATGTTGTTGTAGAACATTGTAATCTATTATCTCTTTCAAAATGCCCCTTCGTGTCTGGTCTTTTTCCTCTTTTAGCAGAGGAATCTTCAAGATCATCGTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAGACTCTCAAGTCAACAGAACCTCATTACGTACGATGTGTGAAGCCAAATTCTTTGAATCAACCACAAGTGTTTGACAATGCAAGCGTCAGACACCAATTGCGCTGTGGGGGTGTCCTTGAGGCCATTCGGATAAGTCTGGCAGGTTATCCTACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTATGGGGTAATAGCCCCTGAATATATGGATGGAAGTTATGATGATAAAGTTGCAACTGAGAAAATTTTGCAAAGGCTGAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTCCAAGCGTGCTGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGCCGGCTGAGGACATTTGTTGCACACAGGGATTTCATCTCAGTTAGAGCAGCAACAGTTTCTCTTCAGGCGTGCTGTAGGGGGTGCATTGCCCGAAAGATGTATGCTACTATACAGGAGACATCAGCGGTTATCTCCATTCAGAAATATATTCGTATGTGGCTAATGAGTCAGGCTTACTTGAAATTATATTCTTCTGCTATTATTATACAATCTCATGTCCGTGGTTTCGCGACTCGCCAAAGAATATTGCATGGAAGAGAGCATAAAGCTGCTACATTTATTCAGGCCTGTTGGAGGATGTCCGAGGTTAGATCAGCCTTCAAGCAATATCAAGCTTCAATTTTGGCAGTACAATGCCTTTGGCGGTGTAGGCAAGCAAGAAAAGAGCTTCGTAGACTTAAACAAGAGGCTAATGAATCTGGTGCCCTCCGTCTAGCCAAGAGTAAACTTGAGAAGCAATTGGAAGAGCTCACCTGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAGCAAGCAGAGATTTCTAGACTTAAAAAGGTGATAGAAGCTTTGAATCTGGAATTAGATGTGGCTAAATTGGCAACAATCAATGAGTGCAACAAGAATGCAGTTCTACAGAATCAATTGAAATTATCAGTGAATGAAAAACCCACTTTAGAAAGAGAGCTATTTGAAATGGAGGAAGTTCGAAAGGAAAATGCTTTGCTAAAGGGTTCTTTGGATGCCTTTGAAAAGAAGTATGCAGCTTTGGAGCTTGAGCTTATGAATGCTCAGAAAAGCTGCAATGAGACCGTTGAGAAATTAAGGGAGTTTGAGCAGAAGTGTTCTCAACTTGAGCGAAATGTGAAAAGCCTTGAGGAAAATGTGTTGAGTTTAGAGGATGAAAATCACGTGCTTCGTCAGAAAGCCATAAGTGCTCCTCCTAAGAGCAATCGTCCAGGTCTTGCTAAGTCATTTTCAGAAAAACACTCAAGTGCAATAGCCTCTCGCGCTGAGCGAAAACCTCTATTTGAATCTCCCACACCTACAAAACATACTACCCCCTTTACACTAGCCATGTCAGACTCTCATCGATCTAGGTTAACCACAGAGAGGAACCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAAAACTTGGGATTTAAAAATGGCAAACCTTTGGCAGCTTGTATCATATACAAAAGTCTTCTTCATTGGCATGCTTTTGAGTTTGAGCGCACAACCATTTTTGATTACATAATTGAAGGCATAAATGAGGCTGTAAAGGTTAGGGATGATGGCTTTGTCTTGCCATATTGGCTGTCCAATACCTCTGCACTTCTATGCCTTTTACAGAGGAACATACGTTCAAATGGCTTTTTAACTACTGCTACTCAACGTCATGCTGGATCTCCTGGCTTGACCATCTGGACAGGGCATGGACTGAAATCCTCATTGAAGTCTCATGGATATGATGATGGTATGTCACATGTGGAGGCGAGGTACCCAGCTATACTTTTTAAGCAACAACTAACTGCTTGTGTAGAAAAGATTTTTGGCCTTATACGTGACAATTTGAAGAAGGAACTTTCTCCACTTCTGGGATTATGTATTCAGGCACCCAAAACAGGACGAGTGCATGGTGGAAAATTGTCTAGATCTCCTGGTGGGCTTCCTCAACAATCACCTGGTGGCCAGTGGGACAACATTGTCAACTTTTTGGATTCACTCATGAGGCAACTACGTGAAAATCATGTGCCATCATTCTTCATCCGTAAGCTAGTTACACAAGTTTTTTCATTCATCAATATTACACTCTTCAACAGTCTTCTCTTGCGGCGTGAATGTTGCACATTTTCAAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTTGAGAAATGGATAGTCAATGCTAAGGAGGAGTATGCAGGAACATCCTGGCACGAGCTGAATTATATCAGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAGGAAATCGTTGAAAGAGATTCGGCAGGATCTCTGTCCGGCATTAACAGTGAGACAAATCTATCGTATCAGTACCATGTACTGGGATGACAAGTACGGAACCCAGAGTGTGTCCAATGAGGCAATTAGTGAAATGAGGGAACTTGTCAGCAAGGACAATCAAAATCTGGCCTCAAATTCTTTCTTGTTGGATGATGATCTAAGCATTCCTTTCTCTGCTGAAGACATAGATATAGCACTTCCTGCCATAGATCCTGATGATGTTGATCTTCCAGCATTTTTATCTGAATATCCTTGTGCCCAGTTTCTCATATCAAATCAAAAGTATGAAATTGTAACCAAACCTTGGCTTTGGCTTCATTCATTTATGTATATACCAGTATTGCTGAATTTTTATCTTTTGGAGTTCCAAATCATTAGTTTAAGCAACAGACTAAAAGCAAAGTTTCCTGATTATTATAGAGCTAAAAACAAACTTTTTTTTAATCTACAGAAAAAAAGCCACCCCTTTCTTTTGGTGACGTATCTTGATTCTGCAGGTGCAACTAAACTGCTGGCAATTGACGGAATGCATGATAGCTGCAGAAATGGTGAAGGTTTCCAATCATCAAGTTCTTTTACTATGAAGGATGAGCAGTTTCATTTCCAAGGGAAGAGTTTGGCATACTTATTGTTGCAGCAGCAATGGCACAATGCTGCTTCAGATCAGCCACCGAGAACGATCGCCAAGCAGAGAAACTCTGCTGCAGAGGAGAAGATGGACTTCGGTGGAAGAAGGGGTGATAATGAATTCAAACTGGAAGTTGAATCCTCACTTGTGAAACTACTGCTGCTATCAGAGTTGTTCATTGCAAGTGCAAGAGCCAAAGAGCTTCTACTTGAGCTTATTGTTCTTTTAGTAATGCCACCACTACTGCTTCTAAAA 5250 0.4065 MRSSVNFDFVITVSSLLIAGTRKLHSLHTSHSSFSPRLRNSNKATMIFHKGSKVWVQDKDLVWVDAEVIGSSSNGIIHLITVSGKTVVSSPEELLARDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYVLNDIYTYTGSILIAVNPFTNLPHLYNTHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDAEKYKLAHPSHFHYLNQSKVYELDGVRNSEEYVNTRRAMHVVGISNEDQEAIFRVLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHMQMAANLFMCDVDLLLATLSTRSIQTREGCIIKALDCNAAVAGRDVLAKTVYARLFDWLVDKINRSVGQDINSQMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEAWLEKEKFSQTDFTMSHYAGKILRRLAAFMQVTYHTDTFLDKNRDYVVVEHCNLLSLSKCPFVSGLFPLLAEESSRSSYKFSSVASRFKQQLQALMETLKSTEPHYVRCVKPNSLNQPQVFDNASVRHQLRCGGVLEAIRISLAGYPTRRTYSEFVDRYGVIAPEYMDGSYDDKVATEKILQRLKLENFQLGRTKVFLRAGQIGILDSKRAEVLDNAAKCIQRRLRTFVAHRDFISVRAATVSLQACCRGCIARKMYATIQETSAVISIQKYIRMWLMSQAYLKLYSSAIIIQSHVRGFATRQRILHGREHKAATFIQACWRMSEVRSAFKQYQASILAVQCLWRCRQARKELRRLKQEANESGALRLAKSKLEKQLEELTWRLHLEKKIRVSNEEAKQAEISRLKKVIEALNLELDVAKLATINECNKNAVLQNQLKLSVNEKPTLERELFEMEEVRKENALLKGSLDAFEKKYAALELELMNAQKSCNETVEKLREFEQKCSQLERNVKSLEENVLSLEDENHVLRQKAISAPPKSNRPGLAKSFSEKHSSAIASRAERKPLFESPTPTKHTTPFTLAMSDSHRSRLTTERNQDNYEFLSRCIKENLGFKNGKPLAACIIYKSLLHWHAFEFERTTIFDYIIEGINEAVKVRDDGFVLPYWLSNTSALLCLLQRNIRSNGFLTTATQRHAGSPGLTIWTGHGLKSSLKSHGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTGRVHGGKLSRSPGGLPQQSPGGQWDNIVNFLDSLMRQLRENHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRRKSLKEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAISEMRELVSKDNQNLASNSFLLDDDLSIPFSAEDIDIALPAIDPDDVDLPAFLSEYPCAQFLISNQKYEIVTKPWLWLHSFMYIPVLLNFYLLEFQIISLSNRLKAKFPDYYRAKNKLFFNLQKKSHPFLLVTYLDSAGATKLLAIDGMHDSCRNGEGFQSSSSFTMKDEQFHFQGKSLAYLLLQQQWHNAASDQPPRTIAKQRNSAAEEKMDFGGRRGDNEFKLEVESSLVKLLLLSELFIASARAKELLLELIVLLVMPPLLLLK 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0830 1750 PRINTS Myosin heavy chain signature 135 154 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 PRINTS Myosin heavy chain signature 192 217 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 PRINTS Myosin heavy chain signature 240 267 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 PRINTS Myosin heavy chain signature 472 500 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 PRINTS Myosin heavy chain signature 525 553 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 PANTHER MYOSIN 47 1548 - -
Lal8g0830 1750 Gene3D - 698 764 - -
Lal8g0830 1750 ProSiteProfiles IQ motif profile. 862 891 IPR000048 GO:0005515
Lal8g0830 1750 CDD MYSc_Myo11 119 751 IPR036018 -
Lal8g0830 1750 SMART iq_5 765 787 IPR000048 GO:0005515
Lal8g0830 1750 SMART iq_5 788 810 IPR000048 GO:0005515
Lal8g0830 1750 SMART iq_5 861 883 IPR000048 GO:0005515
Lal8g0830 1750 SMART iq_5 813 835 IPR000048 GO:0005515
Lal8g0830 1750 SMART iq_5 836 858 IPR000048 GO:0005515
Lal8g0830 1750 SMART iq_5 884 906 IPR000048 GO:0005515
Lal8g0830 1750 ProSiteProfiles Myosin motor domain profile. 105 763 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 816 912 IPR027417 -
Lal8g0830 1750 PANTHER PROTEIN OPAQUE1-LIKE 47 1548 - -
Lal8g0830 1750 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 811 IPR027417 -
Lal8g0830 1750 SMART MYSc_2a 99 764 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 CDD MyosinXI_CBD 1144 1516 IPR037975 GO:0007015
Lal8g0830 1750 Pfam Myosin head (motor domain) 107 751 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 Pfam DIL domain 1369 1472 IPR002710 -
Lal8g0830 1750 MobiDBLite consensus disorder prediction 1110 1141 - -
Lal8g0830 1750 ProSiteProfiles Dilute domain profile. 1193 1493 IPR002710 -
Lal8g0830 1750 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Lal8g0830 1750 Coils Coil 898 918 - -
Lal8g0830 1750 Gene3D - 817 863 - -
Lal8g0830 1750 Gene3D - 864 913 - -
Lal8g0830 1750 Gene3D - 765 816 - -
Lal8g0830 1750 MobiDBLite consensus disorder prediction 1120 1137 - -
Lal8g0830 1750 ProSiteProfiles IQ motif profile. 790 817 IPR000048 GO:0005515
Lal8g0830 1750 Coils Coil 1006 1082 - -
Lal8g0830 1750 SMART DIL_2 1368 1475 IPR002710 -
Lal8g0830 1750 Gene3D - 484 654 - -
Lal8g0830 1750 MobiDBLite consensus disorder prediction 1676 1698 - -
Lal8g0830 1750 Pfam IQ calmodulin-binding motif 863 882 IPR000048 GO:0005515
Lal8g0830 1750 Pfam IQ calmodulin-binding motif 815 834 IPR000048 GO:0005515
Lal8g0830 1750 Pfam IQ calmodulin-binding motif 839 856 IPR000048 GO:0005515
Lal8g0830 1750 Gene3D - 296 350 - -
Lal8g0830 1750 Gene3D Myosin VI head, motor domain, U50 subdomain 351 462 - -
Lal8g0830 1750 Gene3D Kinesin motor domain 105 697 IPR036961 -
Lal8g0830 1750 Coils Coil 947 974 - -
Lal8g0830 1750 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 49 99 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lal8g0830 1750 ProSiteProfiles IQ motif profile. 837 866 IPR000048 GO:0005515
Lal8g0830 1750 SMART AAA_5 191 376 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0830 Lal-Chr8 5985133 6012442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0830 38 1546 Myosins gene family AT4G33200 69.211 0.0 2175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0830 K10357 - gmx:100790815 2483.37