Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0826 ATGATGCTCGAAGGTAACTCACTTGAAGGGGAGATGTTGGGTATTCCAAGTGTGAAGGAGAGGGTCCTACATTGTGTAGAAGTAGATGAGTTGAAGAACCACCAAACTACAAAAATATATAGCCTCCCCCTTGAAATTTCTCATGGACCCATTTACAGCATGAGGAAGCCATGGTTCTGGCTTTCTCTTTTCATCCTCTCCTTCTCTTTTCAAATCTACCCTTCAAGTGCAACTCTAGCTTTCATCTCTACAAACCAAACTCTTTCAGGTGATCAAGTTCTTCTATCTAAAGATGGGATATTTGAACTTGGTTTCTTCAAGCCAGGTAATTCTTCTAATTACTACATATGCATGTGGTACAAAAAAGTCTCTCAAAGAACAATTGTTTGGGTAGCAAATAGAGACAACCCAGTGTCTGATAAGAACACAGCTAAGTTAACAATATTGGAAGGTAATTTAGTTCTCTTAGATGAATCTCAAAGTCAAGTTTGGTCAACAAACTTGAGTTCTCCTACCTCAGGTTCTGTTGTAGCTACTCTTTTAGACAATGGGAATCTCATTTTAAATGATAGTGATGCATCAGATTATCTGTGGCAGAGTTTTGATCATCCAACAGATACATTTCTTCCTGGTTCCAAACTTAAATTGGACAAAAAAACAAAGCAGCCTCAGTATCTAACTTCATGGAAGAACAGTGAAGATCCTGGAACAGGTCTCTACTCTCTGGAACTAGACCCTGAAGGATCCACTGAGTTTCTCATTCTTAGGAATAAAAGTGTAAAGTATTGGACGAGCGGGACATGGAATGGACAAATTTTCAGTTTGGTTCCAGAAATGAGGTTGAATTATATCTTCAACTTTTCTTTTGTGTCAAACGAGAATGAAAGCTATTTCACCTATTCCCTGTATAATACTTCAATTACGTCGCGGCTAATTATGGATGTCTCAGGGCAGATCAAGCAACAGACGTGGTTGGAAAGCACTCAGCAATGGAATTTGTTTTGGTCACAGCCCAGACAACAATGCGATGTCGATGATTTCTGTGGTGCATTTGGGAGCTGCAGTGAAAATTCATTGCCATATTGTAGTTGTCTAACTGGTTTTGTGCCAAAGTCACAATCTGAATGGAACCTTCATGATTACTCAGGTGGGTGTCAGAGATCAACAAGGTTGCAATGTGAGAGTTTCAATCCTTCTAATGGGGACTACAATTTCCGCAAAATTTCCAATATGGCATTACCAAAATATGCAGAAACTGTGAGAACAAGGAACTTTGAGGATTGTGAATCAATCTGCTTGAACAATTGCTCCTGTAGTGCTTATGCATATAATAGTAACCGTTGTTCAATTTGGAATGGAGACCTACTGAATCTTAAACAACTATCTTCAGATGATAGCAGCGGAGAAACTTTGTATCTTAAACTTGCAGCATCTGATCTTCCTAATGCAGGTAAAGGAAAATCCAAAAGAAGACTGTCTTTGATTCTTGGGATTCCTATTGCAAGTGTGGTTGTTATTCTGACATGTGCAACTGTTTATGCTTATATACGAAAAAGGAAAATAGCTCAAAGGCAAGAAAGGGAAATGATTCAGAGATATAGAGGGCGCTTTTATGACAGTGAAAGAGAAGTGAAGGATTTAATAGATGAGGGGCATTTAGAGGAAAAAGACAATGAAGGTATAGAGGTACCATATTTTGATTTTGACAGCATAATAGTTGCAACAGACAACTTCTCACTTGCAAATAAGCTCGGACGAGGCGGTTATGGTCCGGTCTACAAGGGTAAGCTTCAAGATGGTCAAGTTATTGCAGTAAAGAGGCTTTCCAGTGCTTCAAAGCAAGGTTTCAGGGAATTCAAGAATGAAGTTATTTTGATTGCCAAACTTCAGCATAGGAACCTTGTAAGATTAAGAGGCTATTGCATCAAAGGAGAAGAAAAAATTCTACTTTATGAATATATGCCAAACAGGAGCTTAGATTCATTTATATTCGTTCGGGAACAAGGTGTACTTTTGGATTGGCAAATGCGGTTTGATATAATTCGAGGAATTGCTCGAGGGATGCTTTATCTTCACCAAGACTCTAGACTGAGAGTAATTCATAGGGATTTAAAAACCAGCAATATTCTTCTAGACAAGAAGATGCAACCAAAAATTTCAGACTTTGGATTAGCAAAAATATTTGGTGGCAAGGAGACTGAGGGGAATTCAGAGATGCTAGCAGGAACTTATGGATATATGGCTCCTGAGTCTGCCACAAAGGGACTTTTTTCAGCCAAATCTGATGTTTTCAGCTTTGGTGTGGTCCTACTTGAGATTATCAGCGGGAAAAAGAACATGGGGTTCTATGAGTCTGAACAAATTTCAAGTCTTATGGGTTATGCCTGGAGACTATGGACAGAAGAAAGGTTGTTGGATTTAATGGATTCATCTCTGTGTGAAAGTTGCAATATGAATCAATTTACTAGGTCTGTACACATTGGTCTTTTATGTGTACAAGACGATCCGAATGATCGACCATCAATGTCAAATGTTGTGACAATGCTTGGTATTGAAACCCTCCCAGACCCTAAACAACCAACCTTTTATGAAAGAAGGGTTCCAACCAACCATGCTTCTTCCAGTAAACTAGCAACAACTTTGCAACTTGATAGTATCTATGAAAGCTATCAAGATGGTCGATAG 2685 0.3881 MMLEGNSLEGEMLGIPSVKERVLHCVEVDELKNHQTTKIYSLPLEISHGPIYSMRKPWFWLSLFILSFSFQIYPSSATLAFISTNQTLSGDQVLLSKDGIFELGFFKPGNSSNYYICMWYKKVSQRTIVWVANRDNPVSDKNTAKLTILEGNLVLLDESQSQVWSTNLSSPTSGSVVATLLDNGNLILNDSDASDYLWQSFDHPTDTFLPGSKLKLDKKTKQPQYLTSWKNSEDPGTGLYSLELDPEGSTEFLILRNKSVKYWTSGTWNGQIFSLVPEMRLNYIFNFSFVSNENESYFTYSLYNTSITSRLIMDVSGQIKQQTWLESTQQWNLFWSQPRQQCDVDDFCGAFGSCSENSLPYCSCLTGFVPKSQSEWNLHDYSGGCQRSTRLQCESFNPSNGDYNFRKISNMALPKYAETVRTRNFEDCESICLNNCSCSAYAYNSNRCSIWNGDLLNLKQLSSDDSSGETLYLKLAASDLPNAGKGKSKRRLSLILGIPIASVVVILTCATVYAYIRKRKIAQRQEREMIQRYRGRFYDSEREVKDLIDEGHLEEKDNEGIEVPYFDFDSIIVATDNFSLANKLGRGGYGPVYKGKLQDGQVIAVKRLSSASKQGFREFKNEVILIAKLQHRNLVRLRGYCIKGEEKILLYEYMPNRSLDSFIFVREQGVLLDWQMRFDIIRGIARGMLYLHQDSRLRVIHRDLKTSNILLDKKMQPKISDFGLAKIFGGKETEGNSEMLAGTYGYMAPESATKGLFSAKSDVFSFGVVLLEIISGKKNMGFYESEQISSLMGYAWRLWTEERLLDLMDSSLCESCNMNQFTRSVHIGLLCVQDDPNDRPSMSNVVTMLGIETLPDPKQPTFYERRVPTNHASSSKLATTLQLDSIYESYQDGR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0826 894 Pfam D-mannose binding lectin 127 230 IPR001480 -
Lal8g0826 894 CDD B_lectin 85 204 IPR001480 -
Lal8g0826 894 ProSiteProfiles Protein kinase domain profile. 578 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0826 894 Gene3D - 77 202 IPR036426 -
Lal8g0826 894 PIRSF SRK 52 892 IPR024171 GO:0004674
Lal8g0826 894 Pfam S-locus glycoprotein domain 263 372 IPR000858 GO:0048544
Lal8g0826 894 Gene3D Phosphorylase Kinase; domain 1 543 653 - -
Lal8g0826 894 SMART serkin_6 578 849 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0826 894 SUPERFAMILY alpha-D-mannose-specific plant lectins 113 269 IPR036426 -
Lal8g0826 894 CDD PAN_AP_plant 389 476 - -
Lal8g0826 894 CDD STKc_IRAK 584 849 - -
Lal8g0826 894 SUPERFAMILY Protein kinase-like (PK-like) 560 868 IPR011009 -
Lal8g0826 894 Pfam PAN-like domain 402 457 IPR003609 -
Lal8g0826 894 Gene3D Transferase(Phosphotransferase) domain 1 654 856 - -
Lal8g0826 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 875 - -
Lal8g0826 894 ProSiteProfiles Bulb-type lectin domain profile. 79 201 IPR001480 -
Lal8g0826 894 Pfam Protein tyrosine and serine/threonine kinase 580 849 IPR001245 GO:0004672|GO:0006468
Lal8g0826 894 SMART ntp_6 400 475 IPR003609 -
Lal8g0826 894 SUPERFAMILY Hairpin loop containing domain-like 404 459 - -
Lal8g0826 894 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 75 875 - -
Lal8g0826 894 ProSiteProfiles PAN/Apple domain profile. 393 476 IPR003609 -
Lal8g0826 894 SMART blect_4 85 204 IPR001480 -
Lal8g0826 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 699 711 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0826 Lal-Chr8 5929790 5935656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0826 484 880 Receptor kinase-like Gene Family AT4G05200 47.030 7.16e-117 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal8g0826 PK_Tyr_Ser-Thr 6.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0826 - - lang:109358851 1563.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0826 8 5929790 5935656 Lal9g0402 9 2665319 2669565 PCT