Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0825 ATGAAGAAGTGCGAGTTATGCAAAGTTGCAGCTACCACTTTCTGTGACTCAGACCAGGCTAGCTTATGCTGGGACTGCGATTCAAAAGTTCACAGTGCTAACTTCTTGGTAGCTAGACACACCAGGACCCTTCTCTGCCACGCGTGTCAATCTCTCACGCCGTGGAAAGCCTCCGGTGCCACCCTTGGGAACACTGTTTCCCTCTGTCAGGGTTGCGCCGCTGGAACTAGGGTCAACACCGTTGATGTGGAAGAGAGCGAAGGAGACAATGACGATGATATAGATAGCTTGTATGATGAGGGTGAGGACGGAGATAACCAGGTTGTCCCTTTGTCTTCTACGGCGACGGCGCCGCCGGCTTGTAGCTCCTCCAGCGGTGAAGGGTCGGTTACACGGTGCAGCCATCGCGATGAGGATGTTTCTGAATCGACTACGACAGCTTCATTGAAACGACGTCGTGAGGATAATGATTTTCAGGAGGGTTCCAAACGGATGCACGTGTACGGTGCGAACTTGAGAGAGAGGGTTGATTTGTTAGAGTGCGGTGGTGAACCACCGTTGAATGTGTCGTCGGCGACTGTCGTGGGTAGATTTAATGGTTCACGCGGTTGTTGTGATAGTAAAGAATCTGAAGGCAATTGA 642 0.5156 MKKCELCKVAATTFCDSDQASLCWDCDSKVHSANFLVARHTRTLLCHACQSLTPWKASGATLGNTVSLCQGCAAGTRVNTVDVEESEGDNDDDIDSLYDEGEDGDNQVVPLSSTATAPPACSSSSGEGSVTRCSHRDEDVSESTTTASLKRRREDNDFQEGSKRMHVYGANLRERVDLLECGGEPPLNVSSATVVGRFNGSRGCCDSKESEGN 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0825 213 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Lal8g0825 213 MobiDBLite consensus disorder prediction 107 130 - -
Lal8g0825 213 MobiDBLite consensus disorder prediction 131 155 - -
Lal8g0825 213 MobiDBLite consensus disorder prediction 80 155 - -
Lal8g0825 213 SMART bboxneu5 1 45 IPR000315 GO:0008270
Lal8g0825 213 CDD Bbox1_BBX-like 3 45 - -
Lal8g0825 213 PANTHER - 1 210 - -
Lal8g0825 213 MobiDBLite consensus disorder prediction 85 102 - -
Lal8g0825 213 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
Lal8g0825 213 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0825 Lal-Chr8 5922351 5923651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0825 2 100 C2C2-CO-like Transcription Factor Family AT4G27310 56.731 9.66e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal8g0825 zf-B_box 6.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0825 - - lang:109338335 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0825 8 5922351 5923651 Lal8g0825 8 5922351 5923651 ECH
Lal10g0723 10 14968635 14970267 Lal8g0825 8 5922351 5923651 LSH
Lal8g0825 8 5922351 5923651 Lal2g0435 2 2615310 2615765 PCT
Lal2g0435 2 2615310 2615765 Lal8g0825 8 5922351 5923651 PCT