Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0823 ATGGAGTTTGACCTTGAAAACCCTTTTGAAAATTTCCATGACCTTCCCTCTGACTCAGTCCCTTCACTCTTCCTCATTGAATCTGACCACATCCCACCACCAAACTACTTTCACACCCTCAAAAACAGTGACTTTGATATCTCTATTAGAAGACATGTCATTTCTATTATCTCACAGATATCCTGTACCTTTGATCCAGTTCTGTCTTACCTTGCTATCAACTATTTGGATCGGCACCTAGCCAACCAAGGAATATTGCAACCAAAACCATGGGCCAACAAGCTTCTTGCAATCTCTTGTTTTTCTCTAGCTGCTAAGATGATGAAAACAGAGTTCTCTGCCACTTGTGTTCAGGCTCTTCTGAATCAAGGTGATGGTGGTCTCATTTTTGAGACACAAACAATAGAAAGAATGGAATCCATTGTTTTGGGAACTCTACAATGGAGAATGCGCTCCATAACCCCCTTTTCTTTCATTCATTTCTTCATCAATTTATTCAAGCTCGTAGACCCTGCATTGAGCCAGGTTCTGAAAGATCGAGCATCTGAAATTATATTGAAGTCACAAAGAGAGATAAAGGTTTTGGAATTCAAACCATCTATAATAGCTGCATCAGCCCTTCTGTGTGCTTCATATGAGCTATATCCTTATCAATATCTAAGCTTCTTGAAAGCAATATCAGATTGTTCTTATGTAAATAAGGGAAGTGTGCAGCAGTGCTATAATGTCTTAGAAGACATAGCCAAGGAGGAGTACGAATCAGTATTCAATGTAAATTCAAGTTCAGACACACCGATTAATGTTTTAGATGAACATTTTCTGAGTTATGAGAGTGAGAAAACCAATGCAAACAATGCTGCTATGATGCAGGAGAAGGACCATAAGAGAAGGAGAATCACTTATTATGGTAACAATAATCACACGGTCGATATTTCTCATTTTCATCAATGCTGA 954 0.3857 MEFDLENPFENFHDLPSDSVPSLFLIESDHIPPPNYFHTLKNSDFDISIRRHVISIISQISCTFDPVLSYLAINYLDRHLANQGILQPKPWANKLLAISCFSLAAKMMKTEFSATCVQALLNQGDGGLIFETQTIERMESIVLGTLQWRMRSITPFSFIHFFINLFKLVDPALSQVLKDRASEIILKSQREIKVLEFKPSIIAASALLCASYELYPYQYLSFLKAISDCSYVNKGSVQQCYNVLEDIAKEEYESVFNVNSSSDTPINVLDEHFLSYESEKTNANNAAMMQEKDHKRRRITYYGNNNHTVDISHFHQC 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0823 317 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 303 - -
Lal8g0823 317 PANTHER CYCLINS 5 303 IPR039361 -
Lal8g0823 317 Gene3D - 33 151 - -
Lal8g0823 317 SMART cyclin_7 157 249 IPR013763 -
Lal8g0823 317 SMART cyclin_7 51 144 IPR013763 -
Lal8g0823 317 Pfam Cyclin, N-terminal domain 27 150 IPR006671 -
Lal8g0823 317 CDD CYCLIN 50 143 IPR013763 -
Lal8g0823 317 Pfam Cyclin, C-terminal domain 153 262 IPR004367 -
Lal8g0823 317 Gene3D - 23 242 - -
Lal8g0823 317 SUPERFAMILY Cyclin-like 135 249 IPR036915 -
Lal8g0823 317 SMART Cyclin_C_2 153 268 IPR004367 -
Lal8g0823 317 SUPERFAMILY Cyclin-like 14 150 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0823 Lal-Chr8 5900472 5903183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0823 1 300 Core Cell Cycle Gene Families AT4G03270 43.949 2.37e-72 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0823 K18812 - gmx:100799951 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0823 8 5900472 5903183 Lal8g0823 8 5900472 5903183 ECH
Lal10g0722 10 14950391 14954569 Lal8g0823 8 5900472 5903183 LSH