Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0805 ATGAGTAACTACGAATCCAATCCCTTCGCTGCCGAAGATGATGTTAATCCCTTCGCTAATCCTGGAAGTGTCCCCCCTGCAAAGTCAAAGCTCTCACCCCTTCCTCATGAGCCTTATGGTCGTGGGTCAGCAACTGTTGACATTTCTCTTGATACCACCAAGGATATCGAAGCAAAGGAGAAGGCTCTTCAAGCTAGAGAAGCTGAATTGAAAAGAAGGGAACAGGAGCTAAAACGAAAGGAAGATGCTATAGCACGAGCTGGAATAGTTATAGAGGAAAAAAACTGGCCACCTTTTTTACCTCTCATTCATCATGACATAGCAAATGAAATACCATTACATCTACAAAGGGTCCAGTATGTTGCATTTACAACATGGTTGGGTTTGGTAATATGTCTTTTATGGAATATTGTGGCAGTTACTGTAGCTTGGATCAAAGGAGATGGCGTGACAAACTGGTTTCTTGCTATCATATACTTTATTTCTGGCGTTCCAGCATCCTATGTGATGTGGTATCGTCCTCTTTATCGTGCTTCGAGGACGGATAGTGCTCTGAAGTTTGGCATGTTTTTCTTGTCTTATGGGGTGCACATTGCATTTTGCGTTTTTGCTGCAGTTGCTCCTCCAATTGTCTTCAAAGGAAAATCTCTTACAGGGATTCTGCCTGCACTTGAGGTGTTGATCGACAATACATTAGTTGGGATATTCTACTTTATTGGGTTTGGGTTTTTCTGCATTGAATCACTGCTGAGCCTATGGGTTATTCAGGAAGTATACATGTATTTCCGCGGTAGCGGGAAGGCTGCGGCAATGAAGCGTGAAGCCATGATGGCAGCTCTATGA 843 0.433 MSNYESNPFAAEDDVNPFANPGSVPPAKSKLSPLPHEPYGRGSATVDISLDTTKDIEAKEKALQAREAELKRREQELKRKEDAIARAGIVIEEKNWPPFLPLIHHDIANEIPLHLQRVQYVAFTTWLGLVICLLWNIVAVTVAWIKGDGVTNWFLAIIYFISGVPASYVMWYRPLYRASRTDSALKFGMFFLSYGVHIAFCVFAAVAPPIVFKGKSLTGILPALEVLIDNTLVGIFYFIGFGFFCIESLLSLWVIQEVYMYFRGSGKAAAMKREAMMAAL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0805 280 Coils Coil 53 83 - -
Lal8g0805 280 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 20 279 - -
Lal8g0805 280 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 20 279 IPR007273 GO:0015031|GO:0016021
Lal8g0805 280 MobiDBLite consensus disorder prediction 1 45 - -
Lal8g0805 280 Pfam SCAMP family 93 264 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0805 Lal-Chr8 5792532 5797437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0805 1 256 Miscellaneous Gene Families AT1G61250 72.727 8.97e-137 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0805 K19995 - thj:104814492 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0805 8 5792532 5797437 Lal8g0805 8 5792532 5797437 ECH
Lal10g0705 10 14835983 14841748 Lal8g0805 8 5792532 5797437 LSH
Lal8g0805 8 5792532 5797437 Lal1g0476 1 2991112 3004004 PCT
Lal1g0476 1 2991112 3004004 Lal8g0805 8 5792532 5797437 PCT