Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0799 ATGGGGTGTTGTGTCTCAACAAGGAGTGGAAGTAGTACTTATAGTAGTGGGAGCAATGGAGACATAGTCTCTCCATCTTGTCTAGAAATTGGATTTTGTGGTCAAAAGAGAGCAAGGAGAACATTCTCTGATAATGTTATCTCTTTGCATCAGTTACCATGGTTGCCAAACAAAATTGTCACTAATGGAAAAAGCCGGTCTTCTTGCATATTTACACAGCAGGGTCAAAAGGGTGTTAATCAGGACGCAATGATCGTATGGGAAGATTTCATGTCTGAAGATGTGATCTTTTGTGGTGTCTTTGATGGGCATGGTCCGCGCGGTCACCTCGTTGCGCGCAGAGTCCGGGATGCCTTGCCACTGAAATTGATTTCTTCTTTGCATTCTTGTAAGTCAAGGCGAAAAAGGTCAGGTAAAGCTGGTTTCAAAGGGAACATAGAGCCCGAAAATCGAGAGTCTGAGAAAGATATCTCTGCTGAGGATGATCTGAATTCGACGTGGAGAGAAGCTTTCTTGAAGGCATACAAGGCTATGGACAAAGAACTGAAGTCTCATCCAAATTTGAACTGCTTCTGTAGTGGGAGCACTGCTGTAACTATAGTAAAGCAGGGTTCGGAACTATTCATCGGTAGTATTGGCGATTCCCGAGCTATCATGGGATCGAAGGACAGCAATGACTCCATGTTGGCAATTCAGTTGACCGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATAAAGCAGTACAAGGGTAGGGTATTTGCTTTACAAGATGAGCCAGAAGTTCTTAGGGTGTGGTTGCCTTTTGATAATGCACCTGGATTAGCAATGGCTAGGGCATTTGGAGACTTTTGCTTGAAGAAATATGGAGTAATTTCTGTACCTGAGTTTTATCATCACGCCCTTACCGATCGAGATCAGTTCGTTGTTATCGCCTCGGATGGGGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCATCAGCACCGAATCGATCATCAGCTGCGAGGATTGTGGTGGCATCTGCTGCTCGAGAGTGGAAGCTTAAATATCCTACTTCGAAGATGGACGACTGCGCTGTTGTCTGCCTATTTTTCGATGGGAAAATGGACTTGGAATCTGATTGTGATGAGCAATGCTTTTCTTCTGCAACCATCCAAAGCAACCATTTTGGTGATCAAATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCTTTGCCAAGGAACTATACTGTGAGATCTTCTGTAGAAAATGAGACCAATAGAGAACTATCTGTTGATGTTGAAGATGGAATATCATCAGTTGAAAATCAGAACTGGTTAAGTCTGGAGGGCATCACCCGAGTAAACTCATTAGTCCAACTTCCTAGATTTTGTGATGAAAAAGGGCCAAATGCTTTATCCTGA 1425 0.433 MGCCVSTRSGSSTYSSGSNGDIVSPSCLEIGFCGQKRARRTFSDNVISLHQLPWLPNKIVTNGKSRSSCIFTQQGQKGVNQDAMIVWEDFMSEDVIFCGVFDGHGPRGHLVARRVRDALPLKLISSLHSCKSRRKRSGKAGFKGNIEPENRESEKDISAEDDLNSTWREAFLKAYKAMDKELKSHPNLNCFCSGSTAVTIVKQGSELFIGSIGDSRAIMGSKDSNDSMLAIQLTVDLKPDLPREAERIKQYKGRVFALQDEPEVLRVWLPFDNAPGLAMARAFGDFCLKKYGVISVPEFYHHALTDRDQFVVIASDGVWDVLSNEEVVEIVSSAPNRSSAARIVVASAAREWKLKYPTSKMDDCAVVCLFFDGKMDLESDCDEQCFSSATIQSNHFGDQIESDDGQKSEPSLPRNYTVRSSVENETNRELSVDVEDGISSVENQNWLSLEGITRVNSLVQLPRFCDEKGPNALS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0799 474 Pfam Protein phosphatase 2C 142 339 IPR001932 -
Lal8g0799 474 SMART PP2C_4 56 369 IPR001932 -
Lal8g0799 474 ProSiteProfiles PPM-type phosphatase domain profile. 67 371 IPR001932 -
Lal8g0799 474 MobiDBLite consensus disorder prediction 135 158 - -
Lal8g0799 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Lal8g0799 474 MobiDBLite consensus disorder prediction 397 428 - -
Lal8g0799 474 Gene3D - 57 373 IPR036457 -
Lal8g0799 474 MobiDBLite consensus disorder prediction 409 425 - -
Lal8g0799 474 SUPERFAMILY PP2C-like 61 373 IPR036457 -
Lal8g0799 474 CDD PP2Cc 66 371 IPR001932 -
Lal8g0799 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Lal8g0799 474 MobiDBLite consensus disorder prediction 140 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0799 Lal-Chr8 5764289 5768829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0799 1 468 PP2C-type Phosphatase Gene Family AT1G03590 66.316 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0799 - - gmx:100798340 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0799 8 5764289 5768829 Lal8g0799 8 5764289 5768829 ECH
Lal10g0703 10 14816190 14820101 Lal8g0799 8 5764289 5768829 LSH
Lal8g0799 8 5764289 5768829 Lal1g0475 1 2981481 2985403 PCT
Lal8g0799 8 5764289 5768829 Lal2g0451 2 2735084 2747659 PCT
Lal1g0475 1 2981481 2985403 Lal8g0799 8 5764289 5768829 PCT
Lal2g0451 2 2735084 2747659 Lal8g0799 8 5764289 5768829 PCT