Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0796 ATGGAGACTGTTATTTCCAACCAATCTCCACCCACTGGCTTCAAGGGTCTGAGCAAGGAAGAGGAAGAATCACTGTTAGGGCAAGCTGAAATATGGAGATATATGACTAGCTTCACTGACTCTGTGGCTTTAAAAAGTGCTGTGGAGCTTCGCATAGCTGATATTATAGACCGTTTTGGCCAACCCATTTCCCTGTCCAAAATTGTTGAGAACATTGAAGATGCACCCACCCCAGATATTGAGTTGCTTTACAGGATCATGAGAGTGTTAATCCGAAGAAAAATCTTCAGTGCAGTGCAATCTGAAAATGGAGAGACCCTTTATGGCTTGACACGTGCCTCAAAGTGGATCCTACGTGACACAAAAATGACATTAGCACCTATGTTGCTGTTAGAGAACCACCCTTTGCACTTGAGCCCAACTCACTATGTTAGTGAAATCATTAGAGAAGGCACTGAAAATGGCACTGCTTTCTTTAGGTGCCATGGTCATGAGCAATTTGACATGACCGGATTGAACCCAGACTATAACAGGTTGTTCAATGATGGCATGGTGTGCACAGCAAGGATTGTGTCCAAGGCTGTTATATCAGGATACAAAGATGGGTTTAACCAGATTCAGTCTTTGGTTGATGTTGGTGGTGGTATTGGAGGATCACTCTCTGAGATTGTCAGAGCTTATCCACACATTCATGGTATCAATTTTGATTTGTCTCATGTGGTTTCCACAGCACCTAAGTATGATGGAATCACACATGTTGGAGGAGACATGTTTGTGTCCATTCCTAATGCTGATGCTGTTTACATGAAGTGGATTTTGCATGATTGGAGTGACCAACACTGCATCAAGATTTTGAAGAATTGTAGGAAGGCAATACCAGAGAAGAGTGGTAAAGTGATAATTGTGGATCATGTTCTGCAACCTGAAGGGAATGGTCTATTTGATGACACTGGTTTCGCTTTTGACATGATGCTGCTTTCACACAATGCTGGAGGAAAAGAAAGGACTGAAGAAAATTGGAAATGGTTATTTGAACAAACAGGATTCCCTCGTTACAACATCATCAAGATCAATGCATTGCCTTCAATAATTGAGGCCTTTCCAATCTAA 1110 0.4189 METVISNQSPPTGFKGLSKEEEESLLGQAEIWRYMTSFTDSVALKSAVELRIADIIDRFGQPISLSKIVENIEDAPTPDIELLYRIMRVLIRRKIFSAVQSENGETLYGLTRASKWILRDTKMTLAPMLLLENHPLHLSPTHYVSEIIREGTENGTAFFRCHGHEQFDMTGLNPDYNRLFNDGMVCTARIVSKAVISGYKDGFNQIQSLVDVGGGIGGSLSEIVRAYPHIHGINFDLSHVVSTAPKYDGITHVGGDMFVSIPNADAVYMKWILHDWSDQHCIKILKNCRKAIPEKSGKVIIVDHVLQPEGNGLFDDTGFAFDMMLLSHNAGGKERTEENWKWLFEQTGFPRYNIIKINALPSIIEAFPI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0796 369 PANTHER O-METHYLTRANSFERASE 20 368 IPR016461 GO:0008168
Lal8g0796 369 Gene3D - 15 117 IPR036388 -
Lal8g0796 369 Pfam Dimerisation domain 43 90 IPR012967 GO:0046983
Lal8g0796 369 PANTHER (R,S)-RETICULINE 7-O-METHYLTRANSFERASE-LIKE ISOFORM X1 20 368 - -
Lal8g0796 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Lal8g0796 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 120 IPR036390 -
Lal8g0796 369 PIRSF O-mtase 14 369 IPR016461 GO:0008168
Lal8g0796 369 Pfam O-methyltransferase domain 143 349 IPR001077 GO:0008171
Lal8g0796 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
Lal8g0796 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
Lal8g0796 369 CDD AdoMet_MTases 209 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0796 Lal-Chr8 5726658 5732022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0796 42 355 Monolignol Biosynthesis Gene Families AT5G54160 38.580 6.19e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0796 K22588 - gmx:100800801 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0796 8 5726658 5732022 Lal8g0796 8 5726658 5732022 ECH