Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0793 ATGGCTTCAGCTAAAAACAGTTCCAAATTTAGCAAGGGTGTTGTAGAAAACACTCACAACAATGTTTGTGAAAGCCAAGATTGGGAGATTGAAAATGATAAAAGAAAAGTTATGAATTCAAGCTTTCAGAGGCATCAATGGAAGCCTTCCATTTCATCATCATCACATGAAAATAATAGACCTTTCAAGAAGATTCGTAGCCCTGAACCCCAAATCCCAAACCAATCCTCTGTTCCTAGTTCATCCTCTTCAAAAATTGTGTTCCCTTTTGCTTTTGATGATGCTTCACAACATCACAATCCAATGCAAATGCAAATGCAAATGCAATTCCCACACCAATTCAGAACGGTAAACTCGCATATGTTTCGCGAACAATTTCAAGCAGCAACAACAAAAAACAATATGATATCGTTTGAATCCCAACAACAACAACAACAACAACAGAACTCTGTGTATCCACCAATCATAGCAAGAGATCCTGCAATTCTTCAACTACCACAGCAACAACAAGTTCTTCAGAATTGGAGTGATGCAATGAATCTTAGTCCAAATGGGAGAATGATGATGATGATGAACCACAACAATTACATGTTTAGTCCAAATGGTAGACCATTGTTTAGGCCTATAGCGCAGCCGATAAACACTACCAAGCTCTATAGAGGCGTGAGGCAACGCCATTGGGGGAAATGGGTCGCTGAGATTCGCTTACCTCAAAATAGAACTCGTCTTTGGCTAGGCACATTTGACACCGCAGAAGATGCTGCGATGGCCTATGACCGCGAGGCTTTTAAGCTGAGAGGAGAGAATGCTAGGCTCAATTTTCCTGAACACTTTCTTAAAAAGGATAAAGAGACCGGTGCTTCTTCGGAAACTCCACCTCCAATTTCATCGGCTTCTTCTACTTCGACCTCAAGTCACAACACAACATTGCTTCCTGAACAAGTTACTGAAGTCCTTAATGTGCAGCCACCAATGCCAATTGAAGAGGCTTCAGAAAATGACTCGGGGATCGGATCGAGTGACGTTACTTTGAGCGACGAGGTTCCTACAGCTGCTAGAAATTGTGAAGTAGGGGAAGGTGTTTCACAGTCTCAGGAATTGGTTTGGGGAGAAATGTCAGCATGGTTCAATGCTATTCCTGCAGGTTGGGGTCCAGGTAGTCCTGTGTGGGATGATTATGACACTACCAATAACTTTCTTTTGCAATCACAATTTCCTTTTGTTAATCCAAATCAACAAGAATTCAATTTTGGTGATGATGCTCATAGACAAGAAGATAATTCAAATCAACCAGAGAAAGACCCAATTTGTCAAAGTATATTTGTTCTACTTAACCTAATGGAGAGGGGTCGAATGAGGCAAGGGTGTGCAATTAGATTAGGCAAAAGGAGACAATAG 1398 0.412 MASAKNSSKFSKGVVENTHNNVCESQDWEIENDKRKVMNSSFQRHQWKPSISSSSHENNRPFKKIRSPEPQIPNQSSVPSSSSSKIVFPFAFDDASQHHNPMQMQMQMQFPHQFRTVNSHMFREQFQAATTKNNMISFESQQQQQQQQNSVYPPIIARDPAILQLPQQQQVLQNWSDAMNLSPNGRMMMMMNHNNYMFSPNGRPLFRPIAQPINTTKLYRGVRQRHWGKWVAEIRLPQNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPEHFLKKDKETGASSETPPPISSASSTSTSSHNTTLLPEQVTEVLNVQPPMPIEEASENDSGIGSSDVTLSDEVPTAARNCEVGEGVSQSQELVWGEMSAWFNAIPAGWGPGSPVWDDYDTTNNFLLQSQFPFVNPNQQEFNFGDDAHRQEDNSNQPEKDPICQSIFVLLNLMERGRMRQGCAIRLGKRRQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0793 465 MobiDBLite consensus disorder prediction 1 25 - -
Lal8g0793 465 MobiDBLite consensus disorder prediction 69 83 - -
Lal8g0793 465 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 424 - -
Lal8g0793 465 Gene3D AP2/ERF domain 218 277 IPR036955 GO:0003700|GO:0006355
Lal8g0793 465 SMART rav1_2 218 281 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 MobiDBLite consensus disorder prediction 1 83 - -
Lal8g0793 465 MobiDBLite consensus disorder prediction 42 58 - -
Lal8g0793 465 ProSiteProfiles AP2/ERF domain profile. 218 275 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 424 - -
Lal8g0793 465 MobiDBLite consensus disorder prediction 289 308 - -
Lal8g0793 465 CDD AP2 217 277 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 MobiDBLite consensus disorder prediction 280 308 - -
Lal8g0793 465 Pfam AP2 domain 219 267 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 MobiDBLite consensus disorder prediction 26 40 - -
Lal8g0793 465 PRINTS Ethylene responsive element binding protein signature 219 230 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 PRINTS Ethylene responsive element binding protein signature 241 257 IPR001471 GO:0003700|GO:0006355
Lal8g0793 465 SUPERFAMILY DNA-binding domain 218 276 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0793 Lal-Chr8 5706049 5709892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0793 143 393 AP2-EREBP Transcription Factor Family AT2G20880 48.606 1.06e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal8g0793 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0793 - - lang:109337172 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0793 8 5706049 5709892 Lal8g0793 8 5706049 5709892 ECH
Lal10g0700 10 14782822 14784042 Lal8g0793 8 5706049 5709892 LSH