Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0777 ATGAATATTTTGCGAATAGGTTCCTCGAAAAGGGTCGACGGAGTTCGGGATAAAGATAAGTTATTGGATGCTGCTGATATGAAAGCTGCACTACTTGATAAGAAGGCCAATGGTTCAGGGCAGTTGTATGATTATGATAAGAATGGGAAGAAGAAAATCTCGAAACCTGATTCGACTTTTGTTCTTAATCATCCTGGTTTTGGAAGGGTTCCAAAGGCTTCAGAAGGAGAGCAAGTTGCAGCAGGATGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCACGGTTGGATACCACGTAATGCAAATAGTTTTGAGAGGTTTCATAAGATCGGACAAGGAACTTACAGCAATGTTTATAAGGCACGCGATGAGAATCACCAAAAGATTGTTGCCTTGAAGAGGGTACGCTTCGATATTCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGATCATCCAAATGTAATAAAGTTGGAGGGCTTGATAACATCACAGACATCTCGCAGCTTGTACCTTATATTTGAATATATGGAACATGATCTTACTGGACTTGCATCAGGTCCTGGCATTAAGTTTTCTGAACCACAGGTTAAATGTTACATGCAGCAGCTTCTTAGTGGATTGGACCATTGTCATAGGCGTGGCGTCCTCCACCGTGACATAAAGGGATCAAATCTTCTCATTGACAACAATGGCATCTTAAAGATTGCAGATTTTGGTTTGGCAACGTTTTATGACCCTCATCACAGTATTCAAATGACCAGCCGTGTAGTAACTCTGTGGTATAGACCACCGGAACTTTTACTTGGAGCATCTCGATATGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTATATTCTGGCAGGCCCATACTGCGTGGAAAAACCGAGGTTGAGCAATTGCATAAGATTTTTAAACTTTGTGGCTCGCCATCTGAGGACTATTGGCTTAAATTGCGGCTGCGACATTCAACAGCATTCAGGCCTCCACATCATTACAGACATCGTGTTGCAGAAACATTCAAAGAATATCCATCTGCTGCCGTTAAGCTTATAGAAACTCTACTTTCTGTAGATCCTGTACATCGAGGAACAGCAGCTACTGCTCTGAAGAACGAGTTCTTCTCATCGGAACCCCGTCCTTGTGATCCATCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATTGACAGTAAATTGCAGGATGAAGCAAAGGGAAGGCAAGGAGATGTTGGGGGAAAGGAGCAAAAAGTTGAATCTGGAGTTAGACAAGAGAAAGAACCTCGAGCCTTAGCCTCGATGAAAGATAATGCCGAGTCTCGTATATCAATGCAGAAAGGGCATCATAAAAGCCGGAGTGGATTGGTCAACCCTCACAGAGAATCTGTATCTGGATTTTTGGTCTTTCCACACAAAGAAACAGAAGATGTTAAAGAAATAGAAAATTACTTTGCTGGGACTCTTATAAAGAGGCCTTCACATTCAGGTTCATTGGTTCCAGGGTCAGTGGCATCTAGGACTTCATTTTCTGGAAGTCAGAAAGAAAAACCAGTTCCCTTAAGGTCTAAAACAACAATTATAGTGCAAAATCATTTTGAATCAACTAATAGATCAGAGTCAGTAAGAAGGCACGATAAAAAGCGCCTCTCTCAGAGAATTGATCTCAGTCAAATAGAAAATGGAACTGAGAAGTTGATTCAGGATGGGCATGGGTCCAGGGGAAAAAATATCAATGTATCTGGTCCACTATTGGTTCCATCAAACAATGTAGATCAGATGCTCAAAGAGCGTGATCGAAAGATCCAAGAATATTCAAGACGAGCACGAATCGACAAATCTAAAGGTGAGAAAGTTCATGCTCAGCGATAA 1914 0.4206 MNILRIGSSKRVDGVRDKDKLLDAADMKAALLDKKANGSGQLYDYDKNGKKKISKPDSTFVLNHPGFGRVPKASEGEQVAAGWPTWLSSVAGEAIHGWIPRNANSFERFHKIGQGTYSNVYKARDENHQKIVALKRVRFDILDPESVKFMAREILVLRRLDHPNVIKLEGLITSQTSRSLYLIFEYMEHDLTGLASGPGIKFSEPQVKCYMQQLLSGLDHCHRRGVLHRDIKGSNLLIDNNGILKIADFGLATFYDPHHSIQMTSRVVTLWYRPPELLLGASRYGVAVDLWSTGCILGELYSGRPILRGKTEVEQLHKIFKLCGSPSEDYWLKLRLRHSTAFRPPHHYRHRVAETFKEYPSAAVKLIETLLSVDPVHRGTAATALKNEFFSSEPRPCDPSSLPKYPPSKEIDSKLQDEAKGRQGDVGGKEQKVESGVRQEKEPRALASMKDNAESRISMQKGHHKSRSGLVNPHRESVSGFLVFPHKETEDVKEIENYFAGTLIKRPSHSGSLVPGSVASRTSFSGSQKEKPVPLRSKTTIIVQNHFESTNRSESVRRHDKKRLSQRIDLSQIENGTEKLIQDGHGSRGKNINVSGPLLVPSNNVDQMLKERDRKIQEYSRRARIDKSKGEKVHAQR 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0777 637 MobiDBLite consensus disorder prediction 410 449 - -
Lal8g0777 637 MobiDBLite consensus disorder prediction 513 534 - -
Lal8g0777 637 SMART serkin_6 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0777 637 Gene3D Phosphorylase Kinase; domain 1 101 193 - -
Lal8g0777 637 ProSiteProfiles Protein kinase domain profile. 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0777 637 MobiDBLite consensus disorder prediction 510 534 - -
Lal8g0777 637 MobiDBLite consensus disorder prediction 390 473 - -
Lal8g0777 637 MobiDBLite consensus disorder prediction 607 637 - -
Lal8g0777 637 Gene3D Transferase(Phosphotransferase) domain 1 194 427 - -
Lal8g0777 637 SUPERFAMILY Protein kinase-like (PK-like) 99 397 IPR011009 -
Lal8g0777 637 MobiDBLite consensus disorder prediction 575 637 - -
Lal8g0777 637 CDD STKc_CDK9_like 106 390 - -
Lal8g0777 637 Pfam Protein kinase domain 106 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0777 637 PANTHER CELL DIVISION PROTEIN KINASE 523 626 - -
Lal8g0777 637 PANTHER CELL DIVISION PROTEIN KINASE 29 518 - -
Lal8g0777 637 ProSitePatterns Protein kinases ATP-binding region signature. 112 135 IPR017441 GO:0005524
Lal8g0777 637 PANTHER CYCLIN-DEPENDENT KINASE 29 518 - -
Lal8g0777 637 PANTHER CYCLIN-DEPENDENT KINASE 523 626 - -
Lal8g0777 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0777 Lal-Chr8 5574369 5578510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0777 98 434 Core Cell Cycle Gene Families AT5G10270 47.592 8.96e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lal8g0777 Pkinase 5.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0777 - K08819 gmx:100775462 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0689 10 14686436 14692604 Lal8g0777 8 5574369 5578510 LSH
Lal8g0777 8 5574369 5578510 Lal1g0462 1 2900089 2906907 PCT
Lal1g0462 1 2900089 2906907 Lal8g0777 8 5574369 5578510 PCT