Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0776 ATGCCTCCACTTGAGTTCCTAGTTATTCTTCTTCATGCTGTAACCTTTCTGAGTTCAGTTTCTACTACTGAATTTATCTACAATACAAACTTCAACTCTACAAACATCAAGCTATATGGAAATGCGACTATTCAGTCTTCCATTCTAACTCTCACTAATCAGAGTTTTTTCTCCACTGGCCGCGCATTTTACCCTCACAAAATACAAACAAAATCGTCCAACTCGTCCAACCTTCTCCCCTTTGCAACCTCCTTCATTTTTTCAATTGCGAAGATTAAAAACTTTGTTATTACTGGCCATGGCTTCGCTTTCATATTCACACCATCAAGAGGTGTAAACGGTACACGCCCAGCTGAATATCTTGGTCTTTTCAACAGAACAAATCAAGGCAATCCTCATAACCATGTTTTTGGAGTTGAGTTTGATTCAATCAGAAATGAAGAATTCAGTGATATAAATGGCAATCATGTTGGCGTTAACATAAACTCGCTTTCTTCCTCAACTTCATGTGAGGCTGGCTATTGGGGTGGCAAAGATGATAAGGAGTTTAAGGTATTAAAGATAAACAGCGGACAAAATTATCAGGTATGGATTGAGTTTATGGATTCAAGGCTTAATGTTACAATGGCTCGAGCAGGGCAAAAGAAGCCTAACGTGCCTCTTATCAGTAATAATATTAATCTTTCTGAGGTTCTGTTGGGTGAAACATATGTTGGGTTCAGTGCAGCAACAGGCAAGATACTAGACAGTACTAAGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATTGGTGATGCTTTGTTGACAGACAATTTGCCTTCATTTGTCTTTCATAAAGGGTGGTTTTCTAGATCTCCAGCTTTAGTTGGAGGACTCATCAGTATCATCTGTGTGTTAATACTCGGTTGTGGATCCGTGGTGTTGTTCATTCTCTGCAGGGGAAACAAAACAACGGAGGAACTTGAAGAGTGGGAATTGGAGTACTGGCCTCATAGGATTAGTTTCCATGAGATTGATGTAGCAACGAGGGGGTTTTCTGAAGAAAATGTGGTTGCTATAGGAGGAAACGGGAAGGTATATAAAGGAGTTTTGCAAGGGGTAGAAGTTGCAGTCAAGAGAATCCCTCAAGAAAGAGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTACAAGCCTAGGCAGAATGAAACATAGAAACTTGGTCGGGTTGAGAGGCTGGTGCAGAAAAGATAAGGGAAACTTGATTCTAGTTTATGACTTCATGCACAATGGAAGTTTAGACAAAAGGATCTTCGAGTGTGGTAACAGAAAGATACTGACATGGAAAGAGAGGATCCAAGTTTTGAAAGATGTAGCAGCAGGGATTCTATACCTGCATGAGGGTTGGGAAGTTAAGGTCATACATAGAGACATCAAAGCGAGCAATGTTCTACTTGACAAAGACATGAATTCTAGGTTGGGGGACTTCGGATTGGCGCGTATGCATGAACATCATGGCCAAGTGGCTAATACAACAAGAGTAATAGGGACAGTAGGATACATTGCTCCTGAGGTAATTCGAACCGGAAAAGCATCAACCATGTCAGATGTGTTTGGTTTTGGAATATTAGTGCTGGAAGTAATATGTGGGAGAAAACCTGTTGAAGAACATAAGCCAGGACTAGTTGAATGGTTGATGTCCCTAATGGTGATTGGCCAATTGCACATTGCTGTTGATGAAAGGTTGAAGGCTCAGTGGGGATACACTATGGAGGAATCTGAGAGATTGCTTCATTTGGGTTTACTGTGTTCAAATTCAGACTCTAGTATTAGACCAAATATGAGGCAGGTTGTGAAAATGCTAGAAGGGGAAATGGAAGGTATTGAGTCCGATGAAGAAAGTATGGAAATGAGTTTGCTTGGAAAAATAAAATCAGCTGCAATGTGGTCTAAAACTGAATGTACTTTTCCATATAGTGATTACCCTACTTTGGATGAAATTATGATGTTCAGTTTTAGTTCTAAAACAACTACAAGTGGCTCAGTTACCATCCCAGAATCAGAAAGCACCAGAGGAGGCTTGTAG 2070 0.4014 MPPLEFLVILLHAVTFLSSVSTTEFIYNTNFNSTNIKLYGNATIQSSILTLTNQSFFSTGRAFYPHKIQTKSSNSSNLLPFATSFIFSIAKIKNFVITGHGFAFIFTPSRGVNGTRPAEYLGLFNRTNQGNPHNHVFGVEFDSIRNEEFSDINGNHVGVNINSLSSSTSCEAGYWGGKDDKEFKVLKINSGQNYQVWIEFMDSRLNVTMARAGQKKPNVPLISNNINLSEVLLGETYVGFSAATGKILDSTKILAWSFSNSNFSIGDALLTDNLPSFVFHKGWFSRSPALVGGLISIICVLILGCGSVVLFILCRGNKTTEELEEWELEYWPHRISFHEIDVATRGFSEENVVAIGGNGKVYKGVLQGVEVAVKRIPQEREEGMREFLAEVTSLGRMKHRNLVGLRGWCRKDKGNLILVYDFMHNGSLDKRIFECGNRKILTWKERIQVLKDVAAGILYLHEGWEVKVIHRDIKASNVLLDKDMNSRLGDFGLARMHEHHGQVANTTRVIGTVGYIAPEVIRTGKASTMSDVFGFGILVLEVICGRKPVEEHKPGLVEWLMSLMVIGQLHIAVDERLKAQWGYTMEESERLLHLGLLCSNSDSSIRPNMRQVVKMLEGEMEGIESDEESMEMSLLGKIKSAAMWSKTECTFPYSDYPTLDEIMMFSFSSKTTTSGSVTIPESESTRGGL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0776 689 PANTHER - 1 678 - -
Lal8g0776 689 Gene3D Transferase(Phosphotransferase) domain 1 423 638 - -
Lal8g0776 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 7 261 IPR013320 -
Lal8g0776 689 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
Lal8g0776 689 SMART serkin_6 347 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0776 689 Pfam Protein kinase domain 350 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0776 689 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Lal8g0776 689 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0776 689 PANTHER LECTIN RECEPTOR KINASE 1 678 - -
Lal8g0776 689 SUPERFAMILY Protein kinase-like (PK-like) 322 617 IPR011009 -
Lal8g0776 689 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
Lal8g0776 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lal8g0776 689 Gene3D - 21 266 - -
Lal8g0776 689 CDD STKc_IRAK 356 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0776 Lal-Chr8 5571115 5573184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0776 20 564 Receptor kinase-like Gene Family AT4G04960 57.143 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal8g0776 Pkinase 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0776 - - gmx:100804553 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0776 8 5571115 5573184 Lal8g0776 8 5571115 5573184 ECH