Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0763 ATGCTTGCAGTGTCACCTTCAAGAAACACAAGGGATGAAAACCAAGGAGGGATGGAAAGTTTCACAATCGGAGTTGATGATTTTGGTGACCTTTCTGAAGTGAACTTATTGGAAAGTATCAACTTCGATGATATCTTCGATGGCTTCGACATCGATGAAGACATCTTGCCAAATCTTGAGATGGACCTTGATATGTTCACTGAGTTCTCTGAGAACACTAACTCACCTGTTTCAGTGGCAAATGATAAATCTAGTGATTATGTGAATATAATTACTACCAAGAAGAAAGAAGATGAAGATAAAGGTGCTTCTTCAGATTCAGGTACAAATTCTGGGTCAAGTAGTAACGGAGGAGAGATAGTTAACGAAAGAGATGAACCCAAGGTGATTAATCCATCGCTTAAGGAAGGTGAGAAAGGAAGAAAATCTTTATCTCAATCAAAGAATCCTCATGGGAAGAAAAAAGTGAAGGTGGATTGGACCCCAGAATTGCACAGAAGATTTGTGCAAGCAGTGGAGCAGTTAGGAGTGGATAAGGCAGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGTCTCACACGCCATAACATTGCAAGCCACCTTCAGAAATATAGATCACATAGGAAGCATATGCTAGCTCGTGAAGCTGAAGCAGCAAGTTGGAGTCATAGGAAGCAAATGTATGGTCCATTAAGTGCAGGTGGTGGTGGAGTTAAGGGAGAGGTGAACCTTATGGTAGCACCACCAATAATGGGTTTTCCTCCAATTTCACCAACATACCATTTTAGACCCTTACATGTATGGGGGCATCCCAAGATGGATCAGTCTTTTGTGCACAAAGTGTGGCCTAACCATCTTCCTCAATCACCATCACCATGGTTATTGCCTAGAGCTCCACCTCCTAACCCTTCATATTTGCACCAACAGGCTCCAAATGCACTAACCCCAGGAGCATTGTGTTTTCCACAACCTCTGACAACAACGAAATTTGGCTCTCCAATTGTCCCTGGCATTCCACCAAGCCATGCAATGTACAAAGTTGACCCTAGCTCTGCTGTCTCGGCTAGGCAACCTGGCCCTCCTCACTTCCTTGATATCCATCCGTCAAAGGAGAGTTTAGATGCCACTATTGGTGATGTTTTATCAAAACCGTGGCTTCCACTGCCTCTCGGGCTTAAAGCTCCAGCAGTTGATAGTGTGATGGGTGAATTACAGAAACAAGGAATTCCAAAAATCCCACCGTCTTGTGCTTGA 1260 0.4349 MLAVSPSRNTRDENQGGMESFTIGVDDFGDLSEVNLLESINFDDIFDGFDIDEDILPNLEMDLDMFTEFSENTNSPVSVANDKSSDYVNIITTKKKEDEDKGASSDSGTNSGSSSNGGEIVNERDEPKVINPSLKEGEKGRKSLSQSKNPHGKKKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHMLAREAEAASWSHRKQMYGPLSAGGGGVKGEVNLMVAPPIMGFPPISPTYHFRPLHVWGHPKMDQSFVHKVWPNHLPQSPSPWLLPRAPPPNPSYLHQQAPNALTPGALCFPQPLTTTKFGSPIVPGIPPSHAMYKVDPSSAVSARQPGPPHFLDIHPSKESLDATIGDVLSKPWLPLPLGLKAPAVDSVMGELQKQGIPKIPPSCA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0763 419 Pfam Myb-like DNA-binding domain 158 207 IPR001005 -
Lal8g0763 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 152 211 IPR017930 -
Lal8g0763 419 MobiDBLite consensus disorder prediction 121 145 - -
Lal8g0763 419 SUPERFAMILY Homeodomain-like 153 212 IPR009057 -
Lal8g0763 419 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 419 - -
Lal8g0763 419 MobiDBLite consensus disorder prediction 105 120 - -
Lal8g0763 419 MobiDBLite consensus disorder prediction 93 156 - -
Lal8g0763 419 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 419 IPR044825 GO:0003700|GO:0045893
Lal8g0763 419 Gene3D - 152 213 - -
Lal8g0763 419 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 155 209 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0763 Lal-Chr8 5464403 5470011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0763 1 293 G2-like Transcription Factor Family AT5G44190 43.648 4.14e-55 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0763 Myb_DNA-binding 5.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0763 - - gmx:100775671 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0763 8 5464403 5470011 Lal8g0763 8 5464403 5470011 ECH