Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0759 ATGGATGGTGGAGAAATATCATATGGTTTTCTTCATCAGAACACAACCGATCCTGAAGCTGAAGTGATAGCCTTATCACCAAAGACACTAATGGCCACAAACAGATTCGTTTGTGAAATTTGTCTAAAGGGTTTCCAAAGGGATCAAAATCTTCAACTCCATAGACGTGGGCATAACCTTCCTTGGAAGCTAAAGCAGAGAACAAGCAAAGAAGTAAGGAAGCGAGTTTATGTGTGTCCAGAGAAGACTTGTGTGCACAACCATCCCTCAAGGGCACTTGGAGACTTAACTGGGATTAAAAAGCACTTCTGCAGAAAGCATGGTGAGAAGAAGTGGAAATGTGAGAAGTGCTCTAAAAGGTATGCTGTGCAGTCAGATTGGAAAGCACACTCAAAGACTTGTGGCACCAGAGAATACAAATGTGACTGTGGAACTATCTTTTCACGGAGGGATAGCTTCATCACTCACAGGGCCTTCTGTGATGCATTAGCAGAAGAAACAGCTAAGGTAAACGCAGGATCAAACATGGCTTATAGCCTCATGCAAACTTCTATGAGGCCTGACATGGCAACCGATTTCTCTTCAATTTTCAAGCCAATTTCAAATACTGAGGAACCAAGTGATCAAACATATCGGGAACTATCCCTTTGGAATATGGGTCAAACATCTCAGGCTCATGAAACATTTATCAATGGCAATTTGCATGAGATTCATCAACTTGGTTCTGCTACAAGCCAAGGAGGGACACTATATAGTGGTGGCAACCCACTTGTTGTTTCAAGCTCTAACCCTCCACCCTCTAATTATCAACTAAATTGGGTGTTTGAGAATAAGGTCTCATCCAATGGAAATCAAGATTTAACAAGCACTACTACTTCACTTCCACTAGTGAATAATCTTAAGGATACTACAAACCAGCTTGTAAGTGTTCCTTCCTTGTATAGCTCTCAGCACCAATCCAATCGCACAACTTCAGAAAACATCTCAGCCACAGCTTTGTTGCAAAAAGCTGCACAAATTGGGGCAACTTCTTCAACTGAGCCATCATCCCTTGGGAGCTTTGGTTTGAAATCTAGTAACGGTCAAGGTCAAGATGGGAACAAATTTTGTGGCATGTATGGTTCAAGCTCAGTGCTCACTAGTCTTGGGAGTGAGCAAGATAATTCTCTAAGTGATTTGTCACATATGCCCCTTTCAAAGAGAAGGCATGTACAAAATGAAGAGGGTGCAGCCGGGGGGCAAACTAGGGATTTTCTTGGTGTTTCCATGCAAACCATTTGCTACCCTTCATCAATCAACGGATGA 1305 0.4238 MDGGEISYGFLHQNTTDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETAKVNAGSNMAYSLMQTSMRPDMATDFSSIFKPISNTEEPSDQTYRELSLWNMGQTSQAHETFINGNLHEIHQLGSATSQGGTLYSGGNPLVVSSSNPPPSNYQLNWVFENKVSSNGNQDLTSTTTSLPLVNNLKDTTNQLVSVPSLYSSQHQSNRTTSENISATALLQKAAQIGATSSTEPSSLGSFGLKSSNGQGQDGNKFCGMYGSSSVLTSLGSEQDNSLSDLSHMPLSKRRHVQNEEGAAGGQTRDFLGVSMQTICYPSSING 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0759 434 SUPERFAMILY beta-beta-alpha zinc fingers 35 132 IPR036236 -
Lal8g0759 434 PANTHER F-BOX ASSOCIATED PROTEIN 15 433 - -
Lal8g0759 434 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 58 IPR013087 -
Lal8g0759 434 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 15 433 - -
Lal8g0759 434 Gene3D Classic Zinc Finger 69 160 - -
Lal8g0759 434 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0759 Lal-Chr8 5442521 5444809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0759 17 434 IDZ Gene Family AT5G44160 52.018 4.70e-134 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal8g0759 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0759 K25870 - gmx:100778666 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0759 8 5442521 5444809 Lal8g0759 8 5442521 5444809 ECH