Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0749 ATGTATAAAGGAAGAATGGGAATGAAGAGCACTGGGGGAGAGATAGTTCAAGTCCAAGGAGGCCACATTGTTAGATCCACAGGCAAAAAAGATAGGCATAGCAAGGTTTACACTGCGAAAGGTCCTCGCGATAGACGGGTTAGACTCTCGGCTCACACCGCTATTCAATTCTATGATGTTCAAGACCGTTTAGGCTACGACCGACCAAGCAAGGCCGTGGACTGGCTCATCAAGAAGGCTAAATCTGCAATTGACAAGCTTGATCAACTTCCACCATGGCATCCAACTTCTCTCAATCACAACACCAATGAAGGCCATGGGGCAGAGCAGAATGCAGGGTCAAGTGAAATGAATGGTACAATTGGTGAGCATTCTGAGTCTTCTGGTTATAATTTTCAGCTTCAAAGACAACTAGGTGAGGACCCTGATAACCATTTCATCCCATCACCTATTGACACTGATGCTATAGCTTTTTTCCCAACAACAACTGCTCCTTCCTCCATCAATTTCCAAAGCTATCCACCCGATATAATCTCAAGAAACCACCACAACAACTCCACTGAGGATCTTGGCCTTTCTCTTCATTCCTTCCAAGACCATGGTTTGTTTCATGGCCAAACATCACAAGCCGGTGCAAATCAAACACCTTGTTCAAATGAGCAGACCCTTTTCTCTGGCTCATCTCCTGTTGAGTTTGATTCCAATTATCATAGGATTATGAATTGGAACAATGAAGCAAATAATGTTGATATGAACAGAACTGGTTTCATGGTCAATAATAACTCAGCTGCATTTTTAGGCCAAGGTTGTTCTGCTTATCCTCACAGGGGGACCCTTCAGTCCAGTTTTACTCCGTCGCTTCGTTCTTGGAACAATATTCCGATGACTTCTTCTGAGCATCACAAGTCTCAGCCAATTCATCATGCTTCCATCTTTGGAAGCAGGTTTCTTTCTGATGCATTGCCAGGGTTCTGCATTCCTGCTAGGATTCAAGGTGAAGACGATGAGAATGACAGAGTTGGTTCTGATCAACCCTCATCGTCTTCTCCTAATTCTCATCATTGA 1065 0.4394 MYKGRMGMKSTGGEIVQVQGGHIVRSTGKKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDQLPPWHPTSLNHNTNEGHGAEQNAGSSEMNGTIGEHSESSGYNFQLQRQLGEDPDNHFIPSPIDTDAIAFFPTTTAPSSINFQSYPPDIISRNHHNNSTEDLGLSLHSFQDHGLFHGQTSQAGANQTPCSNEQTLFSGSSPVEFDSNYHRIMNWNNEANNVDMNRTGFMVNNNSAAFLGQGCSAYPHRGTLQSSFTPSLRSWNNIPMTSSEHHKSQPIHHASIFGSRFLSDALPGFCIPARIQGEDDENDRVGSDQPSSSSPNSHH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0749 354 PANTHER TRANSCRIPTION FACTOR TCP4 5 354 - -
Lal8g0749 354 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 5 354 IPR005333 GO:0003700
Lal8g0749 354 MobiDBLite consensus disorder prediction 88 128 - -
Lal8g0749 354 MobiDBLite consensus disorder prediction 332 354 - -
Lal8g0749 354 MobiDBLite consensus disorder prediction 94 128 - -
Lal8g0749 354 ProSiteProfiles TCP domain profile. 29 87 IPR017887 -
Lal8g0749 354 Pfam TCP family transcription factor 27 107 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0749 Lal-Chr8 5381320 5382384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0749 13 354 TCP Transcription Factor Family AT3G15030 40.150 1.29e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal8g0749 TCP 2.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0749 - - gmx:100796390 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0749 8 5381320 5382384 Lal2g0623 2 3700961 3702586 ECH
Lal8g0749 8 5381320 5382384 Lal1g0590 1 3768807 3770602 ECH
Lal8g0749 8 5381320 5382384 Lal8g0749 8 5381320 5382384 ECH