Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0732 ATGCTTTCGGTTACATGGCTCCACCTTGAAACAGTTCGAGCTACTGAACTTGGACATGTCTCTTATGGGTTAAGAAGTGTGGGGAAATGGTTTTACATCCAATCAGGCATGAACATGGAGGAAACACGAGAAGACGTTGGGCCAGCAGAGCAAGGGTCGTCTAATGTTTCATGGTGGCCTTCAGATTTCGTTGAAAACTTTGGATCTGTTTCTTTGGCTTATGAAGATGAGAACTTAAATAATAAAGGATCTCCTAGACATTCTGACAAATATGTATTGTCACCTCAGAAAGCATCACAAATTCTCTGGCGCACTGGAATGCTTTTAGAACCGATACCAAATGGTTTTTATTCAGTCGTTCCGGAGACTAGACTCAAGGAACTTTTTGATAGTATTCCTACCTTGGAGGAGCTTTTTGCTTTGGGCGGAGAGGGTTTTAGGGCTGATGTCATTCTTGTGGATTCAGAGAAAGATAAAAAACTAACCATGTTGAAGCAATTGATTGTGGCATTGGTTAAAGGATTGAACTCAAATCTACCCGCAATAATCAAGAAGATAGCTGGAGTAGTTTGTGATTTTTATAAGCGACCCAGTATGGAAGGTCCAGCAAAAGCTGCTCTAGATGAAGCCTATCACATGTTTGAGAATCAAGGTGTGCAGATGCTGGGACAAATGAAGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTAGCTGATACTGTTGGTCTTGAGTGCAAGCTCATGGTGGGCTTTCCAAATGATGGGACTGTTGAATGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTATTAAATTCTGTGGAAATGCTGGTTGATCTAATGCGATTTCCGGGCCAATTGTTACCATGGTCGACCAAGGCAGTATTTATGACTCATATTTCCCCAGCTGGAGAAAGTGATTCTGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATTTGGGGTTTCAGAGAGGTTAGACCCTAACAGCGTTGAGAAGGAGGAAAACCACCAATTCCATAGAAAATCTGAAGCGTCTTCATTGAGAAATATGATGCTACGATCGAATAGCTGCCTGGACAGCAAATTGAGTTTGTCTCATAGTGAACCAAATATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAAGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCGGAACATCCTTCATTTCGAGCACGTGCTCGGTCCATGCTTGGTGGTGATAGGACAGCATTTAGGGATTTTGCTGATGACCAGGCTGCATCAAGGTCTGATGGCACACCATCATCGGAAGCTCGTCGGATACGAAGAAGAAGCATCAGCATTACACCAGAGATAGGTGATGATATCGTAAGGGCTGTACGGGCAATGAGTGAAACACTGAAGCAAAATCGTCTTCTGAGAGGGGATGACAACTCATACTCTCATTCTCCTAAAAGTAGAACTAGTGATGCAAATCTTCAAAAAAATTCAACTTCCAATCTTGATGGTCCCGGTGAAAGTTCTGCCTTGTATTCTTTTCAGCGTGACCAAGTTGCTTCACAAAAGGCAATGTCGTTACCATCTTCACCACATAATTATGGAGGTCCAGCTTCTGGTAGAAGCGGGCCATCAAGACATGGAGTGAATGATGAAATGGAGTCAACTTGGAATAGAGTCCTTGAGTCACCCATGTTCAACAATAAACCTCTTTTACCATATGAAGGATGGAATATTGACTTCTCAGAGTTAACTGTTGGAACTCGTGTAGGTATTGGGTTCTTTGGTGAAGTCTTCCGTGGCATATGGAATGGCACAGATGTTGCAATCAAAGTTTTTCTAGAGCAAGATTTAACTTCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTAAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCTTGCACAAAGCCTCCACGCTTGTCAATGGTTACAGAGTATATGGAGATGGGGTCGTTGTATTACTTAATGCATTTGGGTGGTCAAAAGAAAAGGCTTAGTTGGCGTAGAAGACTGAAGATGTTGCGTGACATATGCAAGGGTTTGATGTGCATACATCGTATGAAGATTGTTCACCGTGATCTGAAAAGTGCAAACTGTCTAGTAAATAAGCATTGGGCCGTGAAAATATGTGATTTTGGGCTTTCAAGAATAATGGCAGATTCTCCAATGACAGATTCTTCTTCAGCTGGAACTCCAGAATGGATGGCTCCTGAACTCATCCGAAATGAACCTTTTACTGAAAAATGCGATATCTTTAGCCTAGGGGTGATAATGTGGGAATTCTGCACCTTGAGCAGACCATGGGAAGGTGTACCACCTGAGAGGGTGGTTTATTCTGTTGCTAATGAGGGTTCCAGATTGGAGATACCTGAAGGACCACTAGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCACATGAGCGGCCAAGTTGTGAGGAGATTCTTTCTCGCTTGGTGGACATTGAGTACTCACTTTGCTGA 2538 0.4263 MLSVTWLHLETVRATELGHVSYGLRSVGKWFYIQSGMNMEETREDVGPAEQGSSNVSWWPSDFVENFGSVSLAYEDENLNNKGSPRHSDKYVLSPQKASQILWRTGMLLEPIPNGFYSVVPETRLKELFDSIPTLEELFALGGEGFRADVILVDSEKDKKLTMLKQLIVALVKGLNSNLPAIIKKIAGVVCDFYKRPSMEGPAKAALDEAYHMFENQGVQMLGQMKHGSCRPRAILFKVLADTVGLECKLMVGFPNDGTVECVDSYKHMSVIVVLNSVEMLVDLMRFPGQLLPWSTKAVFMTHISPAGESDSAENDSCDSPLEPNSPLFGVSERLDPNSVEKEENHQFHRKSEASSLRNMMLRSNSCLDSKLSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARARSMLGGDRTAFRDFADDQAASRSDGTPSSEARRIRRRSISITPEIGDDIVRAVRAMSETLKQNRLLRGDDNSYSHSPKSRTSDANLQKNSTSNLDGPGESSALYSFQRDQVASQKAMSLPSSPHNYGGPASGRSGPSRHGVNDEMESTWNRVLESPMFNNKPLLPYEGWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTSENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLMHLGGQKKRLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWAVKICDFGLSRIMADSPMTDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWEFCTLSRPWEGVPPERVVYSVANEGSRLEIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSLC 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0732 845 MobiDBLite consensus disorder prediction 425 450 - -
Lal8g0732 845 MobiDBLite consensus disorder prediction 526 557 - -
Lal8g0732 845 MobiDBLite consensus disorder prediction 490 514 - -
Lal8g0732 845 SUPERFAMILY Protein kinase-like (PK-like) 562 837 IPR011009 -
Lal8g0732 845 CDD STKc_MAP3K-like 595 837 - -
Lal8g0732 845 Gene3D Transferase(Phosphotransferase) domain 1 668 843 - -
Lal8g0732 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Lal8g0732 845 MobiDBLite consensus disorder prediction 476 514 - -
Lal8g0732 845 Pfam Protein tyrosine and serine/threonine kinase 590 837 IPR001245 GO:0004672|GO:0006468
Lal8g0732 845 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 64 843 - -
Lal8g0732 845 ProSiteProfiles Protein kinase domain profile. 589 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0732 845 Pfam Ethylene-responsive protein kinase Le-CTR1 96 291 - -
Lal8g0732 845 SMART serkin_6 589 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0732 845 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 64 843 - -
Lal8g0732 845 MobiDBLite consensus disorder prediction 310 333 - -
Lal8g0732 845 Gene3D Phosphorylase Kinase; domain 1 582 667 - -
Lal8g0732 845 MobiDBLite consensus disorder prediction 383 410 - -
Lal8g0732 845 MobiDBLite consensus disorder prediction 526 541 - -
Lal8g0732 845 ProSitePatterns Protein kinases ATP-binding region signature. 595 616 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0732 Lal-Chr8 5226293 5241278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0732 39 845 MAP Kinase Kinase Kinase AT3G58640 68.620 0.0 1131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lal8g0732 PK_Tyr_Ser-Thr 6.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0732 - - gmx:100803469 1368.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0732 8 5226293 5241278 Lal8g0732 8 5226293 5241278 ECH
Lal10g0659 10 14398133 14418224 Lal8g0732 8 5226293 5241278 LSH
Lal8g0732 8 5226293 5241278 Lal2g0516 2 3079890 3094539 PCT