Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0730 ATGGCTGAGATGATTTGCATATCTAGATCTAATGAAGACAAGAGTGAAGGTAGTAGCATTAGAGCCAAACCCTCTTCTCTTCTAAGTCCTAGAAAACGTTCTTTCTTGGACTTGAATGAAGAAGCTGTGGATGATATTGGAGATGATAGCATCAGTGACAATGATGGATCATCACAAGAAGGTGGTAATGTGAGTAGCAATAACTCTAGTGAAGAAGGGAAAGAGCAAGGAAATAACAAGGTTAGACAATATGTGAGGTCAAAAATGCCAAGGCTTCGTTGGAATCCTGAACTTCATCTAGCTTTTGTTCATGCTGTTCAGAAGCTTGGTGGACAAGAAAGAGCAACACCCAAGTTGGTTTTACAATTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAGAGTCATTTGCAGATGTACCGAAGTAAAAAGCTTGATGAGTCTGGCCAAGTTTTATCCACAATTAGTGCAATGCAAGGAAGTCATCAAATTTTGGAGATGTATCATAGACTTAATGATGAAGGACACTTTGGGGTTAACAACAAGAACTATCCACCATCATCTCTTATAATCAAACAACCTTATGACATCAAAGCTCATGAATTTCATCACATTGGGCTTTTAAATAATCACATTGTCACAAGATCTAACCAAGTATTTGAAGAAAAGAAGTGGCATTCTCATGGAGTAGTTGGATCACAAGGAAGTAAAAAACACGAATCTATAAGCATTTGTAGGGATAATAACAAGTATAGTAGTGCACAAATTTCTCAATGGAGCACCAACACTAGTTCTATCCATAATCAATATCAACGTAGTTGTTGCAGTCCTATAATGCTTGGCCACACAAAGTTTGATGCTGAGGTTCATGATCTAAAAGGTGGAATGCTAGAATTCACAAAGGAGGTTCAAGTGTCGCAGCAAAGCAATATTAAAGCTCAATTAGAAAGGTTGAATGAGAAGAAAGGGTTACAAAATTTGCTAGAACTAAAGCTAAGTCAAGATTCAGGAATTGTTAGAGAATATATAAAGGGAAAGGAAGAAGATGAACAAGAAATCAATACAATACTTTCTCTTAATTCATTGTTCTCTTCCTCATCATCAAGTTCAATGCAATGA 1122 0.3672 MAEMICISRSNEDKSEGSSIRAKPSSLLSPRKRSFLDLNEEAVDDIGDDSISDNDGSSQEGGNVSSNNSSEEGKEQGNNKVRQYVRSKMPRLRWNPELHLAFVHAVQKLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSTISAMQGSHQILEMYHRLNDEGHFGVNNKNYPPSSLIIKQPYDIKAHEFHHIGLLNNHIVTRSNQVFEEKKWHSHGVVGSQGSKKHESISICRDNNKYSSAQISQWSTNTSSIHNQYQRSCCSPIMLGHTKFDAEVHDLKGGMLEFTKEVQVSQQSNIKAQLERLNEKKGLQNLLELKLSQDSGIVREYIKGKEEDEQEINTILSLNSLFSSSSSSSMQ 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0730 373 MobiDBLite consensus disorder prediction 45 79 - -
Lal8g0730 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 33 370 IPR044848 GO:0003700
Lal8g0730 373 Pfam Myb-like DNA-binding domain 92 142 IPR001005 -
Lal8g0730 373 Gene3D - 89 146 - -
Lal8g0730 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 146 IPR017930 -
Lal8g0730 373 MobiDBLite consensus disorder prediction 52 74 - -
Lal8g0730 373 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 90 145 IPR006447 GO:0003677
Lal8g0730 373 MobiDBLite consensus disorder prediction 1 33 - -
Lal8g0730 373 SUPERFAMILY Homeodomain-like 88 144 IPR009057 -
Lal8g0730 373 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 33 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0730 Lal-Chr8 5214959 5219422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0730 76 151 G2-like Transcription Factor Family AT2G42660 73.684 1.43e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0730 Myb_DNA-binding 8.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0730 - - lang:109337615 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0730 8 5214959 5219422 Lal8g0730 8 5214959 5219422 ECH