Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0722 ATGATAAACTCTAGTTGTGGAAGCTCCGAGTTAGATCTCTGCAGAGACGAGTCAATGGCATTCTTCCTCAAATTTGTGGCCATGGCGTCAATCCTAATTTCAGGGATATGTGGGATAGCGATCCCACTCTTCGGAAAACACCGGCGATTCTTCAGCACCGACGGCAATCTCTTCGTCGCCGCCAAGTCCTTTGCGGCGGGGGTGATCCTTGCCACCGGGTTCGTTCACATGCTGAACGATTCTTATGAGGCACTGAAGGATCCATGCTTGGAATCATATGTGTGGTCCAAGTTTCCTTTCACCGGGTTTTTCGCCATGGTTTCATCGTTGATGACTTTGCTCATTGACTTTATGGGAACACAGTATTATGAGCAGAAACAGCGGATTAAAGGACAGGATTTTGATGCTAATGTTGATGTGAACGGTGATGATTATGTTTCAATGGAATCGGATGGTGAAACGGGAATTGTGGCGGGGAAGGTGTTTGGGGAAGAGGAAAGTGGTGGAATGCATATTGTGGGGATGCGTGCTCATGGGTCCCAACACGGCCATTCTCACGGTGGTGATGACGATGAAAGTAGTGTCCGGCATGTCATTATTTCACAGGTATTAGAACTTGGAATTTTATCACATTCAGTGATAATTGGATTATCTCTAGGAGTTTCACAAAGCCCTTGTACCATAAAACCCTTAATTGCAGCATTATCCTTCCATCAATTCTTTGAAGGGTTTGCACTTGGTGGCTGCATCTCCCAAGCACAATTCAAGACCTCATCATCAACAATAATGGCTTGTTTTTTTGCACTAACAACACCAATAGGTGTTGCCATTGGTACAAGCATTGCTTCAGTATTTAACCCTTACAGTCCAATAGCACTAATCACTGAAGGAATTCTAGATTCTTTTTCTGCTGGGATTTTAATGTACATGGCTTTAGTGGATTTAATTGCAGCTGATTTTCATAGCAAGACAATGCGTTGCAACTTAAGGCTTCAAATTATATCTTACTGTTTGCTTTTCCTTGGGGCTGGATTGATGTCTTCCCTTGCAATCTGGGCATGA 1062 0.4379 MINSSCGSSELDLCRDESMAFFLKFVAMASILISGICGIAIPLFGKHRRFFSTDGNLFVAAKSFAAGVILATGFVHMLNDSYEALKDPCLESYVWSKFPFTGFFAMVSSLMTLLIDFMGTQYYEQKQRIKGQDFDANVDVNGDDYVSMESDGETGIVAGKVFGEEESGGMHIVGMRAHGSQHGHSHGGDDDESSVRHVIISQVLELGILSHSVIIGLSLGVSQSPCTIKPLIAALSFHQFFEGFALGGCISQAQFKTSSSTIMACFFALTTPIGVAIGTSIASVFNPYSPIALITEGILDSFSAGILMYMALVDLIAADFHSKTMRCNLRLQIISYCLLFLGAGLMSSLAIWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0722 353 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 189 - -
Lal8g0722 353 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 187 353 - -
Lal8g0722 353 PANTHER ZINC/IRON TRANSPORTER 187 353 - -
Lal8g0722 353 PANTHER ZINC/IRON TRANSPORTER 1 189 - -
Lal8g0722 353 TIGRFAM zip: ZIP zinc/iron transport family 6 353 IPR004698 GO:0005385|GO:0016021|GO:0071577
Lal8g0722 353 Pfam ZIP Zinc transporter 23 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0722 Lal-Chr8 5141412 5147883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0722 6 353 Inorganic Solute Cotransporters AT1G10970 64.402 2.75e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0722 K14709 - mnt:21402441 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0722 8 5141412 5147883 Lal8g0722 8 5141412 5147883 ECH
Lal8g0722 8 5141412 5147883 Lal25g1012 25 13393944 13397633 LSH
Lal8g0722 8 5141412 5147883 Lal17g0149 17 914375 921924 PCT
Lal8g0722 8 5141412 5147883 Lal4g0165 4 1034090 1036947 PCT
Lal17g0149 17 914375 921924 Lal8g0722 8 5141412 5147883 PCT
Lal4g0165 4 1034090 1036947 Lal8g0722 8 5141412 5147883 PCT