Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0718 ATGCCAAAAATGAAACACCTACTGCGTAAGCTTCACATCGGTGGCACCACCATCAATAACCACCACCACCAAACATTACCACCACCGGAGCCAGAACCGGAACCAATCCCAGTCCTCATCGCTACCACCACTCCGTCATCTTCCTCCTCCGCTTTACCGTCGCCCACTCCAATCGCTCCCGATCCAAACCCTAATAATAATTTTCATTTGTTGGAGGAGGAAGAGTTTGAGATGCAATTGGCTATGGCGATTAGCGCTTCCGATTCCGATGTTGTTAAGAAAGACCCTGAATCTGCTCAGATCGATGCTGCTAAGCAGATCAGTCTTGGTTATGAAGCTTCCGATTCTGATACCCAAGCACTTTCTCAGTTTCAATCCCTTCGTTATTGGAACTACAACGTTGTTGATTACAAAGAGAAAGTGATGGATGGATTTTATGATGTTTATGGCATCACCTCCTCCAATTTGATTGAACGAGGAAGGATGCCGCTGTTGGCAGACTTGCAAACTGCACCTGTATCAAGAAATGTTGACTGTGAAGTGATTTTGGTGAACCGCAGAAATGATATTGAGCTGAAGCAGCTTGAGGAAAAAGCCCGTGCTTTGTTCAAGGAGTGTTTTGTTTCTGAACTCGGATTAATTTTGAGTGGTTTACTTCAGAAACTTGCCGACATTGTTGTTGATAGAATGGGTGGTCCAGTTGGTAATGCTGATAATATCATGAGAAGGTGGGCTATGAGGAGTCGTGAGTTACGGAATTTTTCAAGAACCATTGTTCTTCCCCTTGGCCGTCTTGATGTTGGACTTTCACGTCACCGAGCCCTGCTTTTTAAAGTACTTGCTGACAGGATTAATATTCCCTGCATGTTGGTCAAAGGGAGCTATTACACAGGAAGTGATGATGGGGCCGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATCATTGATTTGATGGGTGCGCCTGGCACTCTTATTCCTGCAGAGGTACCCAGCAGTCAGCTCCAAAACTACGGTTTTAATGTTATGGGTTGTGCAGAGATTGCTGGGCTTCATAACAGCATGCATCCAATGCTTGATGATGGAACTGGAATGTTGGGAGTTTTGTCTGATTTTGGTAGAATTTCAACAGCGGGATGGGTCCCGGCAGAAGAATTATTAGATATGGGGTGTCAAACGAAACCGGATGAAATAAATCATGTTGAAGTAAGTGAAGCGGAGAGATTTAAACATACAAAAGCATATGAATGCTCATCTCATATAGAAGCATCGACTGCAGAAAAGATGCATGTAAAAAATGTCTCCAAGTATGTCCTCAGTGCAGCTAAGAATCCAGAATTTGCTCAAAAACTGCAAAATGTTCTATTAGAAAGTGGTGCGTCGCCTCCTCTTAACCTTTTTTCAGATATCAATTCTCAAGATACAGGTAAAGAAAAAGTAAATGAAAAAAATGATGTTCAAGCTGACCCAAATAGGTTGTTATTAAGTCATGAGAAGTCTCTCGTGTCATCTCAAGGGGTGGGCTGTTCCAGTGATACTAGATTATGTCAATCTGCTAATAGGTTATCTGAACAGGAAATAGAATTGCATACAGATGGCATTAGATTTTATAATTCCTCACAGAGTGATCAAAGAGGAAAAGGGGTTGTAACTGTTTCTGATGGAGTGAATGATCGAGGGCAATCTAAGGCAGTAGTTCTCAATTCAATTTCTATCAATCCACAGAAGATGTGTAAAGAAAAGTGTATTGAGTCTTCCTTGCCCAAGACAGCTGTTTCTTGCGAAAGACATAATGGGGTTGACTGTGTTTGTGATAATGATGAAAATGGTCTTAAAAATAAAGTTGGAGCATCCTTTGAGAACGTTGACTTTGGGAAAGATTCAGCCATTCAAGTAAATGAGACGGCCAGTGAGGATTGTAACCTATATGACGGTAAAAGCAAGAAAGTTAACTCAGTAATGGGTGAAGGCATAGAATGGGAAGTTCAATGGGAGGATCTTTGTATTGGTGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCTGATTGTAATGGCACTGAAGTTGCTGTGAAGAAGTTTCTAGACCAAGATTTCTCGGGTGGTGCACTAGCTCAGTTCAAATCTGAAATTGAGATCATGTTAAGGCTGCGACATCCTAATGTTGTGCTCTTCATGGGAGCAATTACTCGTCCCCCAAATTTCTCTATCTTGACTGAGTTTCTTCCAAGAGGAAGTTTATATAGGCTATTGCATCGACCCAATCTTCGAATTGATGAAAAGAGGCGGTTGCGTATGGCTCTTGATGTGGCTAAGGGAATGAATTACTTGCACACAAGCCATCCTCCTGTTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTCTGTGATTTTGGTCTGTCACGGACAAAACACCATACGTATTTGTCATCAAAATCTTGCGCTGGAACGCCTGAATGGATGGCGCCAGAAGTCTTGAGGAATGAGCCAGCTAATGAGAAGTGTGATGTGTATAGTTTTGGCGTGATCCTGTGGGAGTTGGCTACCACAAGAATCCCCTGGAAAGGTTTGAACCCGATGCAGGTTGTGGGGGCTGTTGGATTCCAAAACAAACGGCTAGAAATTCCAGAAGAAATTGATCCAGTTGTTGCACAAATAATACGTGATTGCTGGCAAGGAGGCACAGTTGCGGCCATCGTTCTCCCAGCTGATGTCCCGACTTTCCCATCTTCAGCATCTGGTTGTCGGAAAAACAAGCTCAACACAGTGAATGAAGTTGTCCACAACATATTAGCTATTACAATAAGATTTGAAGTTGTTTCTGGTTCAAAGAGCCAGTGCAGCTGA 2883 0.4249 MPKMKHLLRKLHIGGTTINNHHHQTLPPPEPEPEPIPVLIATTTPSSSSSALPSPTPIAPDPNPNNNFHLLEEEEFEMQLAMAISASDSDVVKKDPESAQIDAAKQISLGYEASDSDTQALSQFQSLRYWNYNVVDYKEKVMDGFYDVYGITSSNLIERGRMPLLADLQTAPVSRNVDCEVILVNRRNDIELKQLEEKARALFKECFVSELGLILSGLLQKLADIVVDRMGGPVGNADNIMRRWAMRSRELRNFSRTIVLPLGRLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGSDDGAVNLIKADDGSEYIIDLMGAPGTLIPAEVPSSQLQNYGFNVMGCAEIAGLHNSMHPMLDDGTGMLGVLSDFGRISTAGWVPAEELLDMGCQTKPDEINHVEVSEAERFKHTKAYECSSHIEASTAEKMHVKNVSKYVLSAAKNPEFAQKLQNVLLESGASPPLNLFSDINSQDTGKEKVNEKNDVQADPNRLLLSHEKSLVSSQGVGCSSDTRLCQSANRLSEQEIELHTDGIRFYNSSQSDQRGKGVVTVSDGVNDRGQSKAVVLNSISINPQKMCKEKCIESSLPKTAVSCERHNGVDCVCDNDENGLKNKVGASFENVDFGKDSAIQVNETASEDCNLYDGKSKKVNSVMGEGIEWEVQWEDLCIGERIGIGSYGEVYRADCNGTEVAVKKFLDQDFSGGALAQFKSEIEIMLRLRHPNVVLFMGAITRPPNFSILTEFLPRGSLYRLLHRPNLRIDEKRRLRMALDVAKGMNYLHTSHPPVVHRDLKSPNLLVDKHWVVKVCDFGLSRTKHHTYLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATTRIPWKGLNPMQVVGAVGFQNKRLEIPEEIDPVVAQIIRDCWQGGTVAAIVLPADVPTFPSSASGCRKNKLNTVNEVVHNILAITIRFEVVSGSKSQCS 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0718 960 ProSitePatterns Protein kinases ATP-binding region signature. 674 696 IPR017441 GO:0005524
Lal8g0718 960 Coils Coil 185 205 - -
Lal8g0718 960 Pfam Protein tyrosine and serine/threonine kinase 670 904 IPR001245 GO:0004672|GO:0006468
Lal8g0718 960 ProSiteProfiles Protein kinase domain profile. 668 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0718 960 MobiDBLite consensus disorder prediction 18 64 - -
Lal8g0718 960 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 61 904 - -
Lal8g0718 960 MobiDBLite consensus disorder prediction 40 54 - -
Lal8g0718 960 Gene3D Transferase(Phosphotransferase) domain 1 747 911 - -
Lal8g0718 960 SUPERFAMILY Protein kinase-like (PK-like) 658 904 IPR011009 -
Lal8g0718 960 Gene3D Phosphorylase Kinase; domain 1 661 745 - -
Lal8g0718 960 CDD STKc_MAP3K-like 674 904 - -
Lal8g0718 960 Pfam Ethylene-responsive protein kinase Le-CTR1 123 327 - -
Lal8g0718 960 SMART serkin_6 668 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0718 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 787 799 IPR008271 GO:0004672|GO:0006468
Lal8g0718 960 PANTHER SERINE-THREONINE PROTEIN KINASE 61 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0718 Lal-Chr8 5105279 5114788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0718 560 904 MAP Kinase Kinase Kinase AT5G11850 70.435 7.08e-164 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lal8g0718 PK_Tyr_Ser-Thr 2.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0718 K04424 - gmx:100779137 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0718 8 5105279 5114788 Lal8g0718 8 5105279 5114788 ECH