Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal8g0708 | ATGCATAATGTGTGGGATGTACTAAGTAACAATGAGGTTGCATCAATTGTGTGGACAGCAACTAGTGAAGATGAAGCAGCAAGGGCAGTAGTGGAAGGAGCCACTGCTGCATGGAAAAACAAGTACCCTGCTTCTAAGGTAGATGACATCACTGTGCTTTGTCTCTTCATGCACAAGAAACCACAGAACCTCCAGCATATGAAAAGTGACAAGCTACCTTAG | 222 | 0.4414 | MHNVWDVLSNNEVASIVWTATSEDEAARAVVEGATAAWKNKYPASKVDDITVLCLFMHKKPQNLQHMKSDKLP | 73 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal8g0708 | 73 | PANTHER | PROTEIN PHOSPHATASE 2C 72-RELATED | 3 | 62 | - | - | |
| Lal8g0708 | 73 | Gene3D | - | 3 | 69 | IPR036457 | - | |
| Lal8g0708 | 73 | SUPERFAMILY | PP2C-like | 4 | 58 | IPR036457 | - | |
| Lal8g0708 | 73 | PANTHER | ALPHABET, ISOFORM E-RELATED | 3 | 62 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal8g0708 | Lal-Chr8 | 5040390 | 5040678 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lal8g0708 | 3 | 58 | PP2C-type Phosphatase Gene Family | AT1G16220 | 58.929 | 5.20e-16 | 68.6 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal8g0708 | - | - | lja:Lj0g3v0099919.1 | 104.375 |