Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0691 ATGGATGATAGCAATAGCAACACTGATGATGGGAACAATGATAACTGGTTGGGGTTTTCTCTCTCACCCCATATGAAAATGGAGCCACCCCATCATCATCATAATCATCATGAACATGATGATGGTCAAGTTCAACATCATAATCTCTATTATCATCATTCTCAACAAGGTTCTGTTGTTTCTAACACTACTGTTCCCACTAGCTTCTATTGGGAAAATAGTGCTTTTCATTCTCTTCCTTTGTCTATGATGCCTCTCAAATCTGATGGTACACTTTGCATTATAGAAGCTCTCAACAAATCACAAACACTAATGATGGTGCCAAATTCATCTCCAAAACTTGAAGACTTCCTAGGTGGTGCAACTATGGGAAGTGACCAATATGGAGGTTCTGAAAGAGAGGCTATGGCTCTTAGTCTAGACAGCATATACTATAACCAAAATGCTCATGAGTCTCAAACAAGTAGAGACTTTCTTTCTGACCCTTTCAGGCAACATCCATATTATTCAGGACATGGTTGCAATAGTATTTACCAAACACCATTGGAGGAAGAACAAGAAACCAAAGAACCCCATGTCACAGTTTGCAGCACCTCACAAATGCCTCAAGTGAGAGATGAAAGCACTGCTTGCTTCAAAAACTGGGAGCAGCAAATGAATAATAGTACTTCTAGCATTGGAGATGATGTTAATGTTATTGCTTCAGGTTCACCTTCAGGGTCTGTTGGTGTTGGCAGAGTTAGTAGTTTACAGCATTGTGGAAATTTGCAATCTTTAAGCCTTTCCATGAGTCCTGTTTCTCAGTCAAACTGTGTCACTGTTCCTACTGGTACTACTACTACTGAATCAGTGGTCATGGAAACCAAAAAGAGAGGGTCTTCTAAGCTTGGACAGAAACATACTGTGCATAGGAAATCCATTGATACATTTGGGCAGAGAACTTCACAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTGTGGGATAACAGTTGCAAGAAAGAAGGGCAAACAAGGAAAGGAAGACAAGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCATATGATCTTGCATCCCTTAAGTATTGGGGATCTTCGACACATATAAACTTCCCGCTACAAAATTACCAAATGCAACTTGAAGAAATGAAGAACATGAGCAGGCAGGAATATGTTGCTCACTTGAGAAGAAAGAGCAGTGGATTTTCAAGGGGTGCTTCAATATATAGAGGGGTGACAAGGCATCACCAACATGGAAGATGGCAAGCAAGAATAGGCAGAGTTGCAGGAAATAAGGACCTTTATCTTGGGACATTCAGTACACAAGAGGAAGCAGCTGAAGCATATGATGTAGCTGCAATCAAATTTCGCGGGGTAAATGCCGTGACTAACTTCGACATATCTAGATACCATGTTGAAAATATCATGGCCAGTAATACCCTACTTACCGGAGAGCAAGCAAGGAGAAATAACAAAGATAGTGAGCCAAGAACTGAGGCAATTGAGTATAATGTTGTATCAAGCCAGATCATTAACAAAGAAGAACTTGAAGCTGGAAACAACAACAATGAAACCAACGGTTCGGATTGGAATATGGTATTGTATCACCAATCACCACAACAGCATCATCAACAACAACAACAACAACAACAACAACAGTCAGATTCAAATAGTTCTGACCATAAAGCTATGAACTGTGGGAATTATAGAAATGCTGCTTTCTCTATGGCCCTACATGGTCTCATAGGGATTGATTCAGTAGGATCTAGCAACCAGACTATGCTAGATAATGACTCTACTATTAAGGTAGGGACTCATTTTTCAAATCAGTCCCCTCTAGTGACCAATTTAAGCACTTCAAGAGAATGCATCACTCATAAAACTGGCTCTACAACATTGCCTTTTCAAAATCCTCCAATAGGGTCAACAAAGATTGTTAGCCCCATTGATACTAGTGTTAGTTCATGGTTTCCCTCACCATCTATATCAATGTCTCACTTGCCAGTTTTTGCTGCTTGGAATGATGCCTAG 2052 0.4025 MDDSNSNTDDGNNDNWLGFSLSPHMKMEPPHHHHNHHEHDDGQVQHHNLYYHHSQQGSVVSNTTVPTSFYWENSAFHSLPLSMMPLKSDGTLCIIEALNKSQTLMMVPNSSPKLEDFLGGATMGSDQYGGSEREAMALSLDSIYYNQNAHESQTSRDFLSDPFRQHPYYSGHGCNSIYQTPLEEEQETKEPHVTVCSTSQMPQVRDESTACFKNWEQQMNNSTSSIGDDVNVIASGSPSGSVGVGRVSSLQHCGNLQSLSLSMSPVSQSNCVTVPTGTTTTESVVMETKKRGSSKLGQKHTVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQGGYDMEEKAARAYDLASLKYWGSSTHINFPLQNYQMQLEEMKNMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGVNAVTNFDISRYHVENIMASNTLLTGEQARRNNKDSEPRTEAIEYNVVSSQIINKEELEAGNNNNETNGSDWNMVLYHQSPQQHHQQQQQQQQQQSDSNSSDHKAMNCGNYRNAAFSMALHGLIGIDSVGSSNQTMLDNDSTIKVGTHFSNQSPLVTNLSTSRECITHKTGSTTLPFQNPPIGSTKIVSPIDTSVSSWFPSPSISMSHLPVFAAWNDA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0691 683 SMART rav1_2 316 385 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 SMART rav1_2 415 479 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 Pfam AP2 domain 415 465 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 Pfam AP2 domain 316 371 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 SUPERFAMILY DNA-binding domain 315 380 IPR016177 GO:0003677
Lal8g0691 683 MobiDBLite consensus disorder prediction 1 43 - -
Lal8g0691 683 ProSiteProfiles AP2/ERF domain profile. 316 379 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 Gene3D AP2/ERF domain 415 475 IPR036955 GO:0003700|GO:0006355
Lal8g0691 683 Gene3D AP2/ERF domain 315 381 IPR036955 GO:0003700|GO:0006355
Lal8g0691 683 CDD AP2 315 379 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 ProSiteProfiles AP2/ERF domain profile. 415 473 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 PRINTS Ethylene responsive element binding protein signature 317 328 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 PRINTS Ethylene responsive element binding protein signature 455 475 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12 681 - -
Lal8g0691 683 MobiDBLite consensus disorder prediction 545 572 - -
Lal8g0691 683 CDD AP2 414 475 IPR001471 GO:0003700|GO:0006355
Lal8g0691 683 SUPERFAMILY DNA-binding domain 414 475 IPR016177 GO:0003677
Lal8g0691 683 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 12 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0691 Lal-Chr8 4894066 4897961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0691 81 498 AP2-EREBP Transcription Factor Family AT4G37750 55.211 5.70e-147 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lal8g0691 AP2 3.6e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0691 K09285 - gmx:100798179 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0691 8 4894066 4897961 Lal8g0691 8 4894066 4897961 ECH