Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0659 ATGGATCGGATTAAAGGACCATGGAGCCCCGAAGAGGACGAAGCGTTACAAAAGCTGGTTGAGACCCACGGTCCAAGAAACTGGTCTTTGATAAGCAAATCCGTTCCTGGTCGATCCGGCAAGTCGTGCCGTCTACGGTGGTGCAATCAGCTTTCTCCGGAGGTAGAGCACCGTCCATTCTCGCCGGAGGAGGATGACGCCATCATCAGGGCCCACTCTATGTTTGGTAACAAATGGGCAACAATAGCCCGCTTACTTAACGGCCGAACTGATAACGCTGTTAAGAATCACTGGAACTCCACCCTTAAAAGAAAATGCTCCGCCGTTACCGTCTCCGATCCTGAGTCCCCTCCGCTTAAAAGATCCGCTAGCCTCGGAGCGGGTACAACAATTTCGGGTTTATTTCTAAACCCGGGAAGCCCATCCGGGTCCGGGTTAAGCGATCCAGGTTTACCAGCTATCCCAATTCCTCAAACCAAAAACGATGTGTCTTCTACTATGGATCCACCAACTTTGCTTACCTTGTCCCTTCCTGGGTCGGGTCCTAGTAACAACCGGTCCGGGTCCGGGTCGAATCAGACATCAAATTGTAGCCCTACCCAGTTGATGTCACCTGTGCCGGAGAAGCAATTATTCAACGAGGAGTTTTTGGCAGTGATGCAAGAGATGATTAGAGATGAAGTAAGGAGTTACATGTCTGGGATTGAAGTGCAGGGTGGGATGTGTGTACAACAAACCGAAGCAATTAGAAACGCCGTTGTGAAACGTATGGGTGTTAGTAACGTCAAGTAG 792 0.5013 MDRIKGPWSPEEDEALQKLVETHGPRNWSLISKSVPGRSGKSCRLRWCNQLSPEVEHRPFSPEEDDAIIRAHSMFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSAVTVSDPESPPLKRSASLGAGTTISGLFLNPGSPSGSGLSDPGLPAIPIPQTKNDVSSTMDPPTLLTLSLPGSGPSNNRSGSGSNQTSNCSPTQLMSPVPEKQLFNEEFLAVMQEMIRDEVRSYMSGIEVQGGMCVQQTEAIRNAVVKRMGVSNVK 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0659 263 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Lal8g0659 263 PANTHER MYB PROTEIN-RELATED 1 232 - -
Lal8g0659 263 SMART sant 4 53 IPR001005 -
Lal8g0659 263 SMART sant 56 104 IPR001005 -
Lal8g0659 263 Gene3D - 58 120 - -
Lal8g0659 263 CDD SANT 7 49 IPR001005 -
Lal8g0659 263 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 1 232 - -
Lal8g0659 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Lal8g0659 263 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Lal8g0659 263 MobiDBLite consensus disorder prediction 134 204 - -
Lal8g0659 263 CDD SANT 59 102 IPR001005 -
Lal8g0659 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Lal8g0659 263 Pfam Myb-like DNA-binding domain 5 51 IPR001005 -
Lal8g0659 263 Pfam Myb-like DNA-binding domain 59 101 IPR001005 -
Lal8g0659 263 MobiDBLite consensus disorder prediction 158 204 - -
Lal8g0659 263 Gene3D - 4 56 - -
Lal8g0659 263 SUPERFAMILY Homeodomain-like 2 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0659 Lal-Chr8 4634098 4634889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0659 1 236 MYB Transcription Factor Family AT4G37260 54.074 2.12e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal8g0659 Myb_DNA-binding 1.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0659 K09422 - zju:107420003 300.827