Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0655 ATGTCCGACAAAGAAAACCTCGTTCGCCCCCAGCGCGAAGCAAAAAAGAGAGCCGCTGCTGCTATCTCCGAACAAAGCAATACCGGCACTTCCAGGAAGAAAAAGCGCGTCACCTTAGGCAACCTCACTTACCTCCCACCGGATAAACCGGTTTCCGGTTCCGAACTGGGCGCTAACGGCACCCTCAAGAAGAGTAAGCGCGTCCCGTTACGCGAGCTCACCAATTTCCAATTAGAGAAACCGGTTCACGGTTCAGACACCGAGAACAACCGAGTCAGAAAAAAACCCGCAACTGGACCGGATTATAACTCTGATCCTCAGTTCTGTGCCCCTTATGTTTCTGATATCTATGAATATCTTCGCAAAATGGAGGTGGATCCAAGTAGAAGACCGTTATCGGATTATTTACAGAAAGTGCAGAGTGACTTGAATGCGAAGATGAGAGGTGTTTTGGTAGATTGGTTAGTTGAAGTTGCTGAAGAATATAACCTTGTTTCAGATACTCTTTATTTTTGTGTTTCATATATAGATAGGTTTTTGTCTCTCAATGCTTTATCCAGACAGAAGTTGCAGTTACTTGGCGTTTCTTCCATGCTACTTGCTTCAAAATATGAGGAAATTAAGTCACCGGAAGTAGAAGATTTTTGTTTTGTTACTGACAATGCTTACAGCAAAGAACAGGTTGTGGAGATGGAAGCTGATATATTGAAGACCTTGAAGTTTGAATTGGGTGGTCCTACAACTTCTAACCTGCAGTTTGAGTTCCTTTGCTACTACCTAGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTCTTGCCTTCTTTGGTGGCTGCATCTGTTGTATTTCTAGCCAGATTTATGTTAAGCCCGATGACACATCCTTGGAATTCAGCGCTTCATCATCTCACCAGATATGAACCTTCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACCTTTGTAGGAGAGGGGGCAGTTTAAAAGCTGTGAGAGAGAAATATAAGCAGCATAAGTTGCATGGTTGTTTTGGTAACAGTTCAAATGTGTGGCAACGACACCCTCTCCTCCTGAGATACCTCTTTATTTTTGAGTTTAGAGTGACAGGCCCTTGGGCAATTGTGAGTCATGACTTGGCTTTTCTTGCTATGGCTTTGGTTTCAACTACTGGCAGAGACATTGAAAACAGGTTTCCAGACACTAGAAGATTGCACTGGCTGATGCTCGTGGCGCTTGCTGTGAAATGCTATTGCACTTAA 1269 0.4318 MSDKENLVRPQREAKKRAAAAISEQSNTGTSRKKKRVTLGNLTYLPPDKPVSGSELGANGTLKKSKRVPLRELTNFQLEKPVHGSDTENNRVRKKPATGPDYNSDPQFCAPYVSDIYEYLRKMEVDPSRRPLSDYLQKVQSDLNAKMRGVLVDWLVEVAEEYNLVSDTLYFCVSYIDRFLSLNALSRQKLQLLGVSSMLLASKYEEIKSPEVEDFCFVTDNAYSKEQVVEMEADILKTLKFELGGPTTSNLQFEFLCYYLAELSLLDYNCVKFLPSLVAASVVFLARFMLSPMTHPWNSALHHLTRYEPSDLKECILNIHDLYLCRRGGSLKAVREKYKQHKLHGCFGNSSNVWQRHPLLLRYLFIFEFRVTGPWAIVSHDLAFLAMALVSTTGRDIENRFPDTRRLHWLMLVALAVKCYCT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0655 422 MobiDBLite consensus disorder prediction 1 104 - -
Lal8g0655 422 CDD CYCLIN 147 236 IPR013763 -
Lal8g0655 422 Pfam Cyclin, C-terminal domain 250 345 IPR004367 -
Lal8g0655 422 SMART Cyclin_C_2 172 356 IPR004367 -
Lal8g0655 422 SUPERFAMILY Cyclin-like 249 345 IPR036915 -
Lal8g0655 422 Pfam Cyclin, N-terminal domain 115 243 IPR006671 -
Lal8g0655 422 Gene3D - 115 344 - -
Lal8g0655 422 Gene3D - 129 244 - -
Lal8g0655 422 ProSitePatterns Cyclins signature. 148 179 IPR006671 -
Lal8g0655 422 CDD CYCLIN 254 320 IPR013763 -
Lal8g0655 422 MobiDBLite consensus disorder prediction 1 19 - -
Lal8g0655 422 SUPERFAMILY Cyclin-like 104 243 IPR036915 -
Lal8g0655 422 PANTHER CYCLINS 25 344 IPR039361 -
Lal8g0655 422 MobiDBLite consensus disorder prediction 21 37 - -
Lal8g0655 422 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 25 344 - -
Lal8g0655 422 SMART cyclin_7 238 321 IPR013763 -
Lal8g0655 422 SMART cyclin_7 153 237 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0655 Lal-Chr8 4612813 4615773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0655 3 343 Core Cell Cycle Gene Families AT5G43080 51.841 7.40e-119 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0655 K06627 - gmx:100801988 435.647