Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0600 ATGGATAATCTCAGGGCTTTGAATTCTGATAGTAGACTAAAGCACCGGCCTCTGAACACTTTTAGGTTCTTAAGGGGACTGATATGTTTAGTGGTGTTTCTTTCTACAGCTTTTATATGTGTAGTCTATTTAGCACCATTGTCAGTGGTAGTGCTTCCGCTTGTAAGCAAACGTATTAGCAGGAAGGCAGTGTCATTCTTCTTTGGAATATGGCTATCAATGTGGCCCTATCTATTCGAAAAGATAAACAAAACTAAAATCGTCTTTTCGGGGGATAGTATTCCGATGAATGAACGAGTTTTAGTCATTGCTAATCACAGAAATGAGGTTGATTGGATGTTCTTGTGGGATCTTGCACTTCGAAAGGGAAGAATTGGATGCATAAAATATATCATGAAGAGGAGCTTGCTGAAACTACCTGTCTTGGGTTGGGCACTTCACATTCTAGAGTTCATTCCAGTGCAGAGGAAGTGGCAGATGGATGAGCAAATATTGTATCATAAGCTTTCAACATTTGAAGATCCTACAGATCCATTGTGGCTTGCTCTTTTTCCTGAAGGAACTAGTTATACTGAAGAGAGTAGTGAAGCTAGTCAAAAATTTGCTGCTAAAGTTGGGCTCCCTATATTGACCAATGTGTTACTTCCAAAATCAAAGGGCTTTAATGCTTGCTTGTTAGCTCTACGAGACTCAATGGATGCAGTATATGATGTGACTATGTGGTACAAGAATCACCAATGTCCTTCCTTTATGGACATTGTCTTTGGTGTTGATCCTTCAGAAGTGCACCTGCATGTTCGGCGTATTCCGATGGAGGAGATTCCAGTTTCTGAAACTGAAGTTTCTTCTTGGCTAGTTGATACATTCCAGAAGAAGGACCAATTGCTTTCTGATTTCAATGTTCAAGGGCATTTCCCTAACCAAGTAGAAGAGAAGGAACTTTCAACATTTAAGTGCTTGTTTATCTTTACTGTGGTACTTTCTTTCACTGCCATGTTTGTTTATTTAACCCTTTTTTCTCTCATCTGGTTCAAGTTGTATGTAGTTCTATCTTGTGCATATCTTGCTATTGCAACGCGCTACAATTTCCAAATGATGCCTTTAACATATTATGTTAAAGCATTGTATAGCAGCATAACAAACAAGGCAGAATAG 1155 0.3896 MDNLRALNSDSRLKHRPLNTFRFLRGLICLVVFLSTAFICVVYLAPLSVVVLPLVSKRISRKAVSFFFGIWLSMWPYLFEKINKTKIVFSGDSIPMNERVLVIANHRNEVDWMFLWDLALRKGRIGCIKYIMKRSLLKLPVLGWALHILEFIPVQRKWQMDEQILYHKLSTFEDPTDPLWLALFPEGTSYTEESSEASQKFAAKVGLPILTNVLLPKSKGFNACLLALRDSMDAVYDVTMWYKNHQCPSFMDIVFGVDPSEVHLHVRRIPMEEIPVSETEVSSWLVDTFQKKDQLLSDFNVQGHFPNQVEEKELSTFKCLFIFTVVLSFTAMFVYLTLFSLIWFKLYVVLSCAYLAIATRYNFQMMPLTYYVKALYSSITNKAE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0600 384 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 378 - -
Lal8g0600 384 SMART plsc_2 100 214 IPR002123 GO:0016746
Lal8g0600 384 Pfam Acyltransferase 89 243 IPR002123 GO:0016746
Lal8g0600 384 PANTHER LYSOPHOSPHATIDYL ACYLTRANSFERASE 5-RELATED 1 378 - -
Lal8g0600 384 CDD LPLAT_LCLAT1-like 76 267 - -
Lal8g0600 384 Pfam Acyltransferase C-terminus 253 322 IPR032098 -
Lal8g0600 384 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 35 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0600 Lal-Chr8 4164005 4166077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0600 1 367 Miscellaneous Gene Families AT1G75020 59.401 4.53e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0600 K13513 - gmx:100808657 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0600 8 4164005 4166077 Lal8g0600 8 4164005 4166077 ECH
Lal8g0600 8 4164005 4166077 Lal25g0564 25 4149468 4153101 LSH