Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0595 ATGGGTTCCGATGGAGCAACGTCGGCGGCGAGCCGGAGGAAACCGTCGTGGAGGGAGAGAGAGAACAATAGGAGGAGAGAGAGGAGGAGAAGAGCGATAGCTGCGAAGATATATGCTGGTCTTCGAGCTCAAGGGAACTATCGTTTGCCGAAGCACTGTGATAACAATGAAGTGTTGAAAGCTCTTTGTGAAGAAGCTGGTTGGAGAGTAGAAGAAGACGGAACCACTTATCGCAAGGATTGCAAGCCACCTCTAGCCAATGCTGCAGGCACCTCCACAAGAAACACTCCTTTCTCTTCACAAAATCCAAGTCCCATGTCTTCATATTTTCCCAGCCCAATTCCTTCCTACCAAGTCAGTCCTTCCTCTTCATCCTTCCCAAGCCCTTTCCGTTTCAACGGGGACAACATGCCAAGCTTCTTTCCGTGCATGCACAATGACATTTCAGCCTCTCTCACTCCTCTGAGAATATCAAACAGTGCCCCTGTAACACCGCCTATCTCATCTCCAACATCAAGGAATCCTAAACCAATTCCGACATGGGAGTCTATTGCCAAACAATCAATGGCCTCCTTCAACTACCCTTACTTTGCAGCTTCTGCACCTGCTAGCCCTACACACCGTCACCTTTATACTCCAGCCACTATACCGGAGTGTGATGAGTCTGACACTTCCACTACTGCGTCTGGCCAGTGGCTGAAATTCCATGCACTTGCACCCTCTGCATCTGCAATGCCAACCTCTCCAACCTTTAATCTTATTAAAGCTGTTACTCAGCATAGTGTACCAGATAACTCAATCCAAGATATACGAAGTTCTGAAAGAGAGTTTGGGGTACAGGTAAAGCCTTGGGTTGGGGAAAAAATTCATGAAGTAGGATTGGATGATTTGGAACTCACACTTGGAAGCAGGAAGTCTCAAAGTTAG 927 0.4768 MGSDGATSAASRRKPSWRERENNRRRERRRRAIAAKIYAGLRAQGNYRLPKHCDNNEVLKALCEEAGWRVEEDGTTYRKDCKPPLANAAGTSTRNTPFSSQNPSPMSSYFPSPIPSYQVSPSSSSFPSPFRFNGDNMPSFFPCMHNDISASLTPLRISNSAPVTPPISSPTSRNPKPIPTWESIAKQSMASFNYPYFAASAPASPTHRHLYTPATIPECDESDTSTTASGQWLKFHALAPSASAMPTSPTFNLIKAVTQHSVPDNSIQDIRSSEREFGVQVKPWVGEKIHEVGLDDLELTLGSRKSQS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0595 308 Pfam BES1/BZR1 plant transcription factor, N-terminal 11 139 IPR008540 -
Lal8g0595 308 PANTHER PROTEIN BRASSINAZOLE-RESISTANT 1 1 307 - -
Lal8g0595 308 MobiDBLite consensus disorder prediction 88 110 - -
Lal8g0595 308 MobiDBLite consensus disorder prediction 13 28 - -
Lal8g0595 308 MobiDBLite consensus disorder prediction 76 110 - -
Lal8g0595 308 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 307 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lal8g0595 308 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0595 Lal-Chr8 4119851 4122174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0595 12 307 BZR Transcription Factor Family AT1G75080 68.471 1.07e-119 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal8g0595 BES1_N 1.3e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0595 K14503 - gmx:100785743 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0595 8 4119851 4122174 Lal8g0595 8 4119851 4122174 ECH
Lal8g0595 8 4119851 4122174 Lal21g0157 21 1068223 1070962 PCT
Lal21g0157 21 1068223 1070962 Lal8g0595 8 4119851 4122174 PCT