Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0584 ATGACTCCAAAATATAGAGATTGGTTGTGGAAAAAAAGGAAGCACTGGTTTCCAAGAATACAGGAATCAACAATCACTATGTTTCATCTTTGGACCAATTCACAACAAGACCAAGAAAGCAAAGAGCTTTATGCTGAATCCAAGATTAAGGAGCTGAAGGGTGCAATTGGACCCTTATCTGGACACAACTTGAAGTATTGTACTGATGATTGTTTGAAAAGATATCTAGAAGCTAGAAACTGGAATGTAGACAAGTCCAAGAAGATGTTGGAAGATACACTTAAGTGGAGATCAAACTATATGCCTGAGCAAATCCGTTGGGATGAGGTTGCAATGGAAGGGGAGACAGGGAAATTGTACAGAGCAAATTTTCATGATAGACAAGGAAGGACTGTCCTTATTTTGAGACCTGGAATGCAGAACACTTCCTCAATGGAGAATCAGATGCGTCATCTAGTGTATCTTTTGGAAAATGCTATGCTGAATCTTTCACAAGGACAAGAACAAATGGCATGGTTGATAGACTTCACAGGTTGGTCAATAACCAACACTCCAATTAAATCTGCCAGAGAAACCATTAACATTTTACAGAACCACTATCCTGAGAGGCTTGGCATTGCATTTCTTTACAACCCACCTCGTGTTTTTGAAGCTTTTTGGAAGATAGTCAAGTATTTCTTGGATAACAAGACATTTCATAAGGTGAAGTTTGTGTACCCAAAAAATAAAGATAGTGTGGAGCTCATGAAATCTTATTTTGATGAAGAAAATCTTCCTAAAGAATTAGGAGGAACAAGCATATTGACCTATAACCATGAGGATTTCTCAAGATTAATGGCTCAAGATGATTTGAAATGTGCAGCTTTTTGGGAATCTGATAACAATCTTTCAAACCATATTGGCAATGACCTGAGGCACTTTTCTGCAGCATAG 933 0.3794 MTPKYRDWLWKKRKHWFPRIQESTITMFHLWTNSQQDQESKELYAESKIKELKGAIGPLSGHNLKYCTDDCLKRYLEARNWNVDKSKKMLEDTLKWRSNYMPEQIRWDEVAMEGETGKLYRANFHDRQGRTVLILRPGMQNTSSMENQMRHLVYLLENAMLNLSQGQEQMAWLIDFTGWSITNTPIKSARETINILQNHYPERLGIAFLYNPPRVFEAFWKIVKYFLDNKTFHKVKFVYPKNKDSVELMKSYFDEENLPKELGGTSILTYNHEDFSRLMAQDDLKCAAFWESDNNLSNHIGNDLRHFSAA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0584 310 Pfam CRAL/TRIO domain 116 264 IPR001251 -
Lal8g0584 310 SUPERFAMILY CRAL/TRIO N-terminal domain 45 108 IPR036273 -
Lal8g0584 310 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 107 270 IPR001251 -
Lal8g0584 310 SMART CRAL_TRIO_N_2 68 93 IPR011074 -
Lal8g0584 310 PANTHER RANDOM SLUG PROTEIN 5-LIKE 33 299 - -
Lal8g0584 310 CDD SEC14 125 265 IPR001251 -
Lal8g0584 310 Gene3D - 12 305 IPR036865 -
Lal8g0584 310 SUPERFAMILY CRAL/TRIO domain 107 276 IPR036865 -
Lal8g0584 310 PANTHER GH16843P 33 299 - -
Lal8g0584 310 Pfam CRAL/TRIO, N-terminal domain 53 92 IPR011074 -
Lal8g0584 310 SMART sec14_4 113 267 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0584 Lal-Chr8 4059902 4062471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0584 72 259 Acyl Lipid Metabolism Gene Families AT5G47730 26.341 4.75e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0584 - - lang:109347670 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0584 8 4059902 4062471 Lal8g0584 8 4059902 4062471 ECH
Lal8g0584 8 4059902 4062471 Lal25g0555 25 4050803 4057066 LSH