Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0557 ATGTGGTGCTTCATGCCCAAACAGTTTCAACTTCATTTGGCCATGCTGCTCACGCAGTTTGGCTTTGCTGGATTTCATGTGCTCTCTAGAGCTGCCCTTAACATGGGTGTCAACAAACTCATCTTTGCAGTCTATAGGAACCTTATTGCTCTTCTTCTACTCCTTCCCTTTGCCTACTTCTTCGAAAAGAAAGAGAGGCCAGCGATTACTTTCAGCATCCTCATTCAGTTCTTTCTTCTGGCACTTGTAGGGATAGAGCAAGTGAGTCTGAAAAGAAAAGATGGGGTGGCTAAGTTAGCAGGAACCATATTCTGTGTAGCTGGGGCTACAGTGATTACACTTTACAAGGGTCCAACAATATATAGCCCAAATCCACCACTACATAACAGCATCATCACAACAACAACAACAACAAAAGTATTTGATTTTGGGTCAGTTTCAGTTGGAGATGCAAAGGCAAAGAACTGGGTCCTTGGTTGCTTCTATCTCATAGGACATTGTTTGTCTTGGGCTGCTTGGCTTGTGTTTCAAACACCTCTCCTTAAAAAATACCCTGCTCGTCTCTCTGTAACTTCCTACACTTTTTTCTTTGGGCTCTTGCAATTTCTTCTTATTGCTTTGATATTCGTAAGAGATGCAAAGGCTTGGCTTTTTCACTCTGCTCAAGAAGCTGTTGCAATTTTATACGGGGGAGTGGTGATATCCGGAATTGCCTTTACTGTACAAATATGGTGCATTGACAGAGGTGGTCCTGTATTCGTTGCTATGTTTCAGCCTGTACAGACTTTTGTTGTTGCACTTTTTGGTTCACTTGCTTTAGGCGAAGAATTCTACTTGGGAGGGATAATTGGAGCAGTGTTGATAGTAGGGGGAATGTACCTAGTCTTATGGGGTAAGAGTGAAGAGAAGAAATTTCTAAAGAAACAACTTGCAATTGCAGAACATAGCATCATTAGTCCTGCAAGCCATGCCAAAGCTTCACTTAATCAGCCACTCCTCCCATCATCAACCAAAAATATTTTATAA 1026 0.4191 MWCFMPKQFQLHLAMLLTQFGFAGFHVLSRAALNMGVNKLIFAVYRNLIALLLLLPFAYFFEKKERPAITFSILIQFFLLALVGIEQVSLKRKDGVAKLAGTIFCVAGATVITLYKGPTIYSPNPPLHNSIITTTTTTKVFDFGSVSVGDAKAKNWVLGCFYLIGHCLSWAAWLVFQTPLLKKYPARLSVTSYTFFFGLLQFLLIALIFVRDAKAWLFHSAQEAVAILYGGVVISGIAFTVQIWCIDRGGPVFVAMFQPVQTFVVALFGSLALGEEFYLGGIIGAVLIVGGMYLVLWGKSEEKKFLKKQLAIAEHSIISPASHAKASLNQPLLPSSTKNIL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0557 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 300 - -
Lal8g0557 341 PANTHER WAT1-RELATED PROTEIN 85 317 IPR030184 GO:0016021|GO:0022857
Lal8g0557 341 PANTHER WAT1-RELATED PROTEIN 7 85 IPR030184 GO:0016021|GO:0022857
Lal8g0557 341 PANTHER WAT1-RELATED PROTEIN 85 317 - -
Lal8g0557 341 PANTHER WAT1-RELATED PROTEIN 7 85 - -
Lal8g0557 341 Pfam EamA-like transporter family 158 296 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0557 Lal-Chr8 3864664 3868940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0557 5 340 Nodulin-like Gene Family AT1G75500 57.330 5.18e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0557 - - gmx:100792395 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0557 8 3864664 3868940 Lal8g0557 8 3864664 3868940 ECH
Lal8g0557 8 3864664 3868940 Lal25g0540 25 3937119 3940647 LSH
Lal8g0557 8 3864664 3868940 Lal10g0868 10 16185446 16189089 LSH
Lal8g0557 8 3864664 3868940 Lal21g0132 21 926979 929881 PCT
Lal21g0132 21 926979 929881 Lal8g0557 8 3864664 3868940 PCT