Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0547 ATGGGGAAATCTAACTCCTGCTTCAAATTAATCGTATGTGGCGCTAATTCTGCCGAAAATGATGGTTACGAAGAATTAGATACCGAGATCAAGGATTCTAATGACAAACGTGGTTGGAGTTTCCGGAAGAGATCTGAAAGGCATCGTGTGCTTAGCAATATTGTGATAACAGAGACCCCATCTTCTGTAAATAAGGAGAGTTCAGAATGTACAAGCATTAGTTGTCAACCACGGGCAGAATCTAATGTTGTAGAGAAGATTTACACATCAAATTTCTCAGATGGGAAGCCCCATTTGTCCTCCAAAGCAAGCTCTCAAATGTCAGAAACAATTATCACTGAAACTGAAAGTGAGGTGGATGTCAATAAAGCAGAGTCTTATGTTATCATAATCCAGGCTGCCATTAGAGGTTTCTTGGCTCAAAGAGAACTTCTGAAAAGTAAGAATGTTGTTAAGTTGCAAGCTGCTGTTCGCGGGCACTTGGTCAGGCAGCATGCTGTAGGAACACTACGTTGTGTTCAAGCTATTGTTAAAATGCAAGTCCTTGTGCGAGTTCGTCGTGCTCGAGAATCACACTCAAGAAATCATTTAAAGAACAAGGATGGCAAAAATGATTGCTCAAAATCTTCGGTTTTCCGGTTCAATTGCTTAACCTGCAGTCAGACTGCTGACTTGTTGACCTATCCTTCTAACCGGGTCAAGCTCCAGTTGTGGGGTACTGAACATGATGTGACCAAATCAAATGTGACGTACACTTCAATTGAGAGGCTTCTCAGTAACAGCTTTGCTCGTCAGCTGTTGGATTCAACTCCAAAAAACAAGCCTATCCATGTCAAATGCAATCCTTCTAAAGCTGATGGTCCTGCTTGGAAATGGTTAGAGAGATGGATGTCTGTTTCATCATCAGATTCTGCAGAGTACAACAAACCAATTTCCATATCAGAGCAATCCAATGCGACCAAAGATAGCAGCACATCTTTGTCTCAATTGGGAGCAGTTATTCCAGCTGAAGTTTTTCTTCAGTCAGCTGACTCAAAACACACTGTTGAGTATTCATCCCTTCCTTCTATGGATGAAGAGAAGTCGACTACCTATGATGCTACTAACTTCAACTTTCAAGCTGGCTCCTTTGCATCTTCTCTTGTAAAAGATAACTCAGAACAAGGTCCTCCTGAAGGGATGATTACACATGATGCTAAAGTAACCACAGCTGAAATTAATTCTTTGCAAAATGAAGAATGGGAATCAGATGCAAGTGTCCCAGAAGAGCCTAGTTTTCTTCCTCAGAAGCCTGAAATTGATGAACAGTGCAAACTATCTACAAAAAGATTTTCCTCAGACCAGCTCGAGACGGAGGGAAAGAACATTGGAGATGTAGCTAGGAAGTTCAGTAACACTGCATTTATTGCGGCACAATCAAAATTTGAAGGTAGGTCAGGCAGTTTGTCAAACCAGGGTGCACAGGTTGAATCAGAAGCATACACCTCTTCTGTTGCAACAGATACTGCATACAGATCAAAAGAGTTCTTATCTGGTAATTCTGCTCCATATCCTCCTAGAACTGGTGGTTATGAATGTGGTACTGAGATATCAATTTCTTCCACTCTTGATTCACCTGATAGATTCGAGGCCAGGGCTATGGAAAGTGAGAATGATTCCCATGGTCTACCAGAAGGGATATGTAATTCTAAAAAGAAGATAGATCACGGCTTTGAGACCAAATTTCTTTCTGCCACTTCGACTTCTAGCCTAATTAACTCTGGTTTGGATCAAACAGAGGTTGTTGGTGATGTCATAGGCGATATGGTTCATTCGGTGGTAGTTGGGGACTCCAAACAGCCTGTTGTTCAGTTTGAGAAAAATGCACCTGACCTATTGACAGAACAAGCAGGGTCTGTTCTGCAAGATTTCAAGTTATCTCCAGAAGCTTCACAAAGAAGCCAGATGACCATCACCGAATCACAAGGAACACCTTCAAGTCAGGTATCAGTTAAACCGAAAGAGAGTAAAATCAGCAAGACTGGGTCCAGCCATAAACGTAGAATCCTGTCCAAGGGTAACAAATCTCCTGCAAATGCAAATCATGATTCTGGCTCAAGAGGTAGTGCGGAACAGTTGCCTAAACATCAGACGAGTGGAAAGAGGCGCAATTCTTTCAGCTCAGTAAAATATGATCACATTGATCAAGAACCTAGAGACAATGGAAGTAATGATAGTTCTCTTCCCCGTTTCATGCAAGCTACAAAATCTGCTAGGGCAAAGATAAGTGCTAATAACTCTCCAAGATCAACTCCCGATTTGCGTGAGCGTGACCAAGATATCCACGTAAAGAGACATTCCTTACCTGGTGCAACTGGCAGGCAGGGATCTCCAGGCATCCAGCAAGCATCTGAAGTGCATCAGATCACAAAGGGAAATGTCGCAAATGCTCTTTATGCACGAAATGTTTTTCAGACTCTGCTTAGTTTTCTTAGGCCAAGAGAAAATGGCAGAGATGAATTGACAGACACTTGGCAGAAGTGTGCTCACATTCCTCTACAATGGTTGATGATGAGTCCTGGAGTGGCACCTTCGCAATTTGTAGCTCTGATTACATTTACTAATTAA 2607 0.4208 MGKSNSCFKLIVCGANSAENDGYEELDTEIKDSNDKRGWSFRKRSERHRVLSNIVITETPSSVNKESSECTSISCQPRAESNVVEKIYTSNFSDGKPHLSSKASSQMSETIITETESEVDVNKAESYVIIIQAAIRGFLAQRELLKSKNVVKLQAAVRGHLVRQHAVGTLRCVQAIVKMQVLVRVRRARESHSRNHLKNKDGKNDCSKSSVFRFNCLTCSQTADLLTYPSNRVKLQLWGTEHDVTKSNVTYTSIERLLSNSFARQLLDSTPKNKPIHVKCNPSKADGPAWKWLERWMSVSSSDSAEYNKPISISEQSNATKDSSTSLSQLGAVIPAEVFLQSADSKHTVEYSSLPSMDEEKSTTYDATNFNFQAGSFASSLVKDNSEQGPPEGMITHDAKVTTAEINSLQNEEWESDASVPEEPSFLPQKPEIDEQCKLSTKRFSSDQLETEGKNIGDVARKFSNTAFIAAQSKFEGRSGSLSNQGAQVESEAYTSSVATDTAYRSKEFLSGNSAPYPPRTGGYECGTEISISSTLDSPDRFEARAMESENDSHGLPEGICNSKKKIDHGFETKFLSATSTSSLINSGLDQTEVVGDVIGDMVHSVVVGDSKQPVVQFEKNAPDLLTEQAGSVLQDFKLSPEASQRSQMTITESQGTPSSQVSVKPKESKISKTGSSHKRRILSKGNKSPANANHDSGSRGSAEQLPKHQTSGKRRNSFSSVKYDHIDQEPRDNGSNDSSLPRFMQATKSARAKISANNSPRSTPDLRERDQDIHVKRHSLPGATGRQGSPGIQQASEVHQITKGNVANALYARNVFQTLLSFLRPRENGRDELTDTWQKCAHIPLQWLMMSPGVAPSQFVALITFTN 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0547 868 Pfam IQ calmodulin-binding motif 128 144 IPR000048 GO:0005515
Lal8g0547 868 Pfam IQ calmodulin-binding motif 148 165 IPR000048 GO:0005515
Lal8g0547 868 ProSiteProfiles IQ motif profile. 124 152 IPR000048 GO:0005515
Lal8g0547 868 MobiDBLite consensus disorder prediction 687 718 - -
Lal8g0547 868 SMART iq_5 123 145 IPR000048 GO:0005515
Lal8g0547 868 SMART iq_5 146 167 IPR000048 GO:0005515
Lal8g0547 868 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 192 IPR027417 -
Lal8g0547 868 PANTHER PROTEIN IQ-DOMAIN 32 1 811 - -
Lal8g0547 868 PANTHER IQ-DOMAIN 5-RELATED 1 811 - -
Lal8g0547 868 MobiDBLite consensus disorder prediction 640 670 - -
Lal8g0547 868 Pfam Protein of unknown function (DUF4005) 720 804 IPR025064 -
Lal8g0547 868 ProSiteProfiles IQ motif profile. 146 175 IPR000048 GO:0005515
Lal8g0547 868 MobiDBLite consensus disorder prediction 734 763 - -
Lal8g0547 868 MobiDBLite consensus disorder prediction 719 733 - -
Lal8g0547 868 MobiDBLite consensus disorder prediction 640 773 - -
Lal8g0547 868 Gene3D - 121 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0547 Lal-Chr8 3778049 3783954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0547 99 804 IQD Protein Family AT1G19870 34.324 6.79e-88 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0547 - - aprc:113847201 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0547 8 3778049 3783954 Lal8g0547 8 3778049 3783954 ECH