Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0526 ATGAGAAACTGTGAAGCAACACATGTAGCTATGGAAATAGAGGCCAGCAAGGTAACAGAGAATGGAACAACACTTCCAGGGTTGAGTCCTTTGAGTGAAACGATTTGGAGAGAAAAGACAGACACAGAGATGATAGGAGATGTTTCAGCAAGGCTTACATGGAAGGATCTAACTGTGATGGTTACACTTAGCAATGGAGAAACTCAGAATGTTTTGGAGGGTCTAACTGGCTATGCTGAACCTGGTACCTTCACTGCTCTCATGGGACCATCAGGTTCAGGAAAATCTACTCTTCTTGATGCTCTTTCTAGTCGTTTGGCTGCAAATGCTTTCCTCTCAGGCACCATTCTTCTCAATGGTCGCAAAGCCAAGCTCTCTTTTGGCACTGCTGCTTACGTGACACAAGATGACAACTTAATTGGTACCTTAACTGTACGAGAAACAATATCATATTCAGCAAGGTTGCGTTTACCTGATAAGATGGCATGGTCAGATAAAAGAGCTTTGGTTGAAAGTACCATTGTTGCAATGGGTCTTCAAGATTGTGCTGACACAGTTATAGGGAACTGGCACTTACGTGGGATAAGTGGTGGAGAGAAGAGAAGGGTTAGCATTGCTTTGGAAATTTTGATGAGACCTAGATTGCTTTTTCTTGATGAACCAACCAGTGGCCTTGACAGTGCTTCAGCTTTCTTTGTAACTCAGACACTACGTGCCTTGGCAAGAGATGGGAGAACTGTGATAGCTTCTATTCATCAACCAAGTAGTGAAGTGTTTGAACTATTTGACCAATTGTACTTGCTTTCTGGTGGCAAGACTGTTTATTTTGGCCAAGCTTCTGAAGCATATGAGTTCTTTGCACAAGCTGGCTTTCCATGTCCTGCTTTGAGGAACCCTTCGGATCATTTTCTTAGGTGTGTCAATTCTGATTTTGACAAAGTCAAGAGCACACTTAAAGGGTCCATGAAATTAAGGTTTGAGGGAAGTGATGATCCCTTAGACAAGATCACTACTGCTGAAGCAATAAGAACTCTTCTTGACTACTACCGCACTTCTCAGCAATCTTATGCTGCAAGACAAAAAGTTGATGAGATATCCAAAGTTAAGGGGACTGTGCTTGATGCAGGAGGAAGTCAAGCTAGTTTCTTCATGCAGTCTTATGTCTTAACCAAGCGCTCATTCATCAACATGTCAAGAGATTTTGGCTACTACTGGCTTAGGCTTGTAATCTACATTGTTGTCACTCTTTGCATTGGAACCATTTATTTGAATGTTGGGACTGGCTACAACTCAATTCTGGCTAGGGGTTCATGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGATATGAAGGTTTTTCAAAGGGAGAGGCTTAATGGACACTATGGTGTCCTTGGATTTGTCATCAGCAACACGATATCTGCAACGCCGTTCCTGATATTGATTACCTTTCTCTCAGGAACAATTTGTTACTTCATGGTTCGGCTGCATCCTGGTTTTTGGCACTACCTCTTCTTTGTGTTGTGCCTTTATGCAAGTGTTACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGTATTGTTCCTAACTTCCTCATGGGCATCATAATTGGAGCAGGGATTCAGGGCATATTCATGTTGGTCTCTGGCTACTTTAGGCTCCCACATGATATCCCAAAACCTGTGTGGCGCTACCCAATGTCTTATATCAGTTTCCACTATTGGGCATTACAGGGCCAATACCAAAATGATCTACGGGGATTGATATTCGATAACCAGACACCGGACCTTCCTAAGATACCCGGAGAATACATCTTAGAATATGTGTTCCAGATTGATGTTAAGAGATCGAAGTGGATAGACTTAAGTGTAATCTTGAGCATGATCGTCATCTACCGCATTATTTTCTTCATAATGATTAAAATCAATGAGGATGTGACTCCTTGGGTTAGAGGATACTTAGCTAGGAGAAGAATGCAGCAGAAGAGTGGAGCTCAGAATACAACTATTGCACCTGATGTTCTTACTCAGTCACCATCTCTCAGAGCCTACATTTCTACTCAAACAAAAAATGGAACTTCCAAAAGTTAA 2124 0.4181 MRNCEATHVAMEIEASKVTENGTTLPGLSPLSETIWREKTDTEMIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMAWSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCVNSDFDKVKSTLKGSMKLRFEGSDDPLDKITTAEAIRTLLDYYRTSQQSYAARQKVDEISKVKGTVLDAGGSQASFFMQSYVLTKRSFINMSRDFGYYWLRLVIYIVVTLCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVLGFVISNTISATPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHYWALQGQYQNDLRGLIFDNQTPDLPKIPGEYILEYVFQIDVKRSKWIDLSVILSMIVIYRIIFFIMIKINEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRAYISTQTKNGTSKS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0526 707 CDD ABCG_EPDR 49 277 - -
Lal8g0526 707 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 697 - -
Lal8g0526 707 Pfam ABC-2 type transporter 385 591 IPR013525 GO:0016020|GO:0140359
Lal8g0526 707 Gene3D - 42 290 IPR027417 -
Lal8g0526 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 289 IPR027417 -
Lal8g0526 707 SMART AAA_5 81 252 IPR003593 -
Lal8g0526 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 295 IPR003439 GO:0005524
Lal8g0526 707 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Lal8g0526 707 PANTHER OS04G0528300 PROTEIN 5 697 - -
Lal8g0526 707 Pfam ABC transporter 74 223 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0526 Lal-Chr8 3590739 3596304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0526 82 256 Calmodulin-binding Proteins AT2G36910 33.871 1.56e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0526 K05681 - gmx:100803731 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0526 8 3590739 3596304 Lal25g0524 25 3752158 3761987 LSH
Lal8g0526 8 3590739 3596304 Lal10g0894 10 16432823 16438559 LSH