Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0520 ATGTTGGTGCTAGAGGGTAGAGGCATTGGAAGAATAAATCTTGATTGGAGCACAAGGGTAGCTATTATCAAAGACATAGCAAAGGGTCTTAATTTCTTTCATCATTCTTTGTCTTCTCAAAAGGTCCCTCATGGTAACCTCAAATCATCCAATGTCCTAATAAGTTATGATGATAACCATGGTTACCATTCCAAGCTCACAGACTATGGCTTCTTACCTCTACTCCAAACTAAAAAAGTTGCAGCAAAACTAGCTATAAGTAAGTCACCAGAATTTGTTCAAGGGAAGAAGTTGACACATAAAACTGATGTTTATTGCTTTGGTATCATTGTGCTAGAGATTATAACTAGAAAAGTTCCTGGTCAAATCTTAGAAAAAGAAGGACATGATGCAATGTTGAAGCTTACAGAGTTAGCTCTTGAGTGTACTGATATGGTATCAAAGAAAAGGCCTAAAATGAGTGCAGTTTTGAGGAGAATAGAAGAGATAGAGCAAATGGAATTGAAGAATGACTGA 516 0.3663 MLVLEGRGIGRINLDWSTRVAIIKDIAKGLNFFHHSLSSQKVPHGNLKSSNVLISYDDNHGYHSKLTDYGFLPLLQTKKVAAKLAISKSPEFVQGKKLTHKTDVYCFGIIVLEIITRKVPGQILEKEGHDAMLKLTELALECTDMVSKKRPKMSAVLRRIEEIEQMELKND 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0520 171 Pfam Protein kinase domain 20 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0520 171 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 6 165 - -
Lal8g0520 171 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 165 - -
Lal8g0520 171 Gene3D Transferase(Phosphotransferase) domain 1 5 171 - -
Lal8g0520 171 SUPERFAMILY Protein kinase-like (PK-like) 10 164 IPR011009 -
Lal8g0520 171 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0520 Lal-Chr8 3551405 3552002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0520 1 163 Receptor kinase-like Gene Family AT3G42880 37.245 2.20e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal8g0520 Pkinase 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0520 - - lang:109357930 273.863