Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0497 CTTTCCAATTTCTTTGCCTGTTCTCAAATCCTAGTGAGAGAAAACAACCTTTCTCTCTCTGCATTCTTCTTCAGCCACTCTCTTCTACTCTCAACCCTTGCATTCAAATCAACTTCAACCGTTTCCCCTTTCTATTTTCTTCAAGTCTTAATCATGGGGAGGAAGAGGAGAACTGAAGGACCCAGTGGGGGGGAAATCAATGAGCATCAACAACACCCTGCTGAAAGGAGTGCCCCACCCCCTCAACAATTTGCCCCTCCAGCTGGAGTTGCAGGAGGACACCAAGGAGGACGTGGGGGTTATGCACCTCAAGGAGGACGTGGGGGTGGTTATGGCGGGCGTGGTCGTGGAAATTCCCAACAACAATATGGTGGTCCCCCGGACTATCAACAAGGTAGAGGAAGGGGTGGGCCTCCGCAGCAAGGCGGTCGTGGTGGAGGATATGGTGGTGGACGCAGTGAATATGGTGGTGGTAGCCGTGGTGGTGGCGGGTATGGTGGTGGCGGTGGCCGAGGTGGTGGTATGGGAAGTGGCCGTGGTGTCGGACCTGGAACTTCATTTGATGGCCCATCCAGGCCACCTTACCCCGAACTGCACCAAGCAACCCCAGTTCCATACCAAGCTGGGGTGACTCCTCAGTCTACACCTGCTGAGGCAGGACCTTCTTCGCAGGCACCTGAGCCTTTACCAGTGGAACAGCAAATGGAGCAGCTGTCTATTCAATTAGAAGCTGATGATGTTCCTGCTCCACCTCCTGTTGCTCCCCCTGCCAGCAAGTCATCAATTAGGTTTCCCCTCCGTCCTGGAAAGGGTACATTTGGCCATAAATGTATCGTCAAGGCCAATCACTTCTTTGCTGAGCTTCCTAATAAAGATTTGCATCAATATGATGTCACAATTACTCCAGAAGTGACTTCAAGGGGTGTGAACCGAGCTGTGATGGAGCAACTCGTGAAGCTGTATCGTGAATCTCATCTTGGAAAGAGACTCCCTGCTTATGACGGCCGCAAGAGCCTCTACACTGCTGGCCCGCTTCCTTTTGTGTCAAGGGAGTTTCGAGTCTCTCTTATTGATGAAGATGATGGATCAGGAGCGCAGAGGAGAGAAAGGGAGTTCAAAGTTGTGATAAAAATGGCTGCACGGGCAGACCTTCATCATTTAGGACTCTTTCTGCAGGGGAGGCAAACTGATGCCCCTCAGGAAGCTCTGCAAGTTCTTGACATTGTCCTGCGTGAACTCCCTACGTCCAGGTATTGTCCAGTAGGAAGATCATTTTATTCTCCTGATCTGGGTAGAAGGCAGCCGTTAGGTGAGGGTTTGGAAAGTTGGCGTGGTTTCTATCAAAGTATCCGTCCCACTCAGATGGGGCTGTCTCTGAACATTGATATGTCCTCCACTGCATTTATTGAGCCATTGCCTGTAATCGATTTTGTAACTCAACTGCTGAACAGGGATGTCTCTCAGCGACCAATGTCCGATTCTGATCGTGTGAAGATAAAAAAAGCACTGCGGGGCATAAGAGTTGAAGTAACACATCGTGGAAACATGAGAAGAAAATATCGTATCTCGGGTCTTACCTCACAGGCTACTAGAGAGCTGACGTTCCCCGTGGATGAGATGGGAACAATGAAATCTGTTGTGGAATATTTCTTTGAGACATATGGTTTTATCATAAAGCATACCCAGTGGCCTTGTTTGCAAGTAGGCAATACACAGAGGCCAAACTATTTACCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCAAAGAGGCTGAATGAGCGGCAGATTACTGCATTGCTCAAAGTCACATGCCAGCGTCCTGTTGAGAGGGAGCGTGATATTATGCAGACTGTACATCACAATGCCTACCATGAGGATCCATATGCCAAAGAGTTTGGAATTAAAATAAGTGAAAAACTTGCCCATGTTGAAGCTCGCATCCTCCCTCCACCTCGGCTCAAATATCATGATACAGGTAGAGAAAAAGATTGCTTGCCTCAGGTTGGCCAATGGAACATGATGAATAAGAAAATGGTCAACGGGGGAACAGTCAATCACTGGTTCTGCATAAATTTTGCAAGGAATGTTCAAGATAGTGTTGCCCGTGGTTTTTGTTTTGAACTTGCCCAGATGTGTCAAATATCTGGCATGGCATTCAATCCAGACCCAGTAGTTCCTGCACTCGGTGCTCGCCCTGACCAAGTTGAAAAAGTTCTGAAAAATAGGCACTCTGATGCTAAAAGCAGATTGAAGGGGCAGGATCTTGATCTGCTCATTGTTATTTTGCCTGATAACAATGGCTCTCTTTATGGTGACCTCAAACGTATATGTGAGACAGATCTTGGGGTTGTTTCCCAATGTTGTTTAACAAAGCACGTATTTAAAATGAGCAAGCAGTACCTTGCAAATGTTGCTTTGAAAATTAATGTCAAAGTTGGAGGAAGGAACACCGTGCTTGTTGATGCGCTTTCACGACGCATACCCTTGGTTAGTGACAGGCCTACAATTATTTTTGGAGCTGATGTGACTCATCCACATCCCGGAGAGGATTATAGTCCTTCGATTGCAGCTGTTGTGGCTTCTCAAGACTGGCCTGAAATTACCAAGTATGCTGGTCTGGTTTGTGCCCAAGCACACAGGCAAGAGCTTATCCAGGATCTATTTAAGCAGTGGCAAGATCCTGTCAGAGGGACTGTGACTGGAGGAATGGTCAAGGAACTTCTCATATCTTTCCGTAGGGCTACAGGGCAGAAGCCTACCCGTATCATATTTTACAGGGATGGTGTTAGCGAGGGCCAGTTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATTCGGAAGGCTTGTGCATCCCTTGAGCCTAACTATCAGCCACCTGTGACGTTTGTGGTGGTTCAGAAGCGCCATCATACAAGGCTCTTTGCGAGCAATCATAACGACAGGGGTTCTGTAGATAGGAGTGGGAATATATTACCTGGAACAGTGGTAGACTCCAAAATCTGTCATCCCACAGAATTTGACTTTTATCTCTGCAGTCATGCTGGAATACAGGGTACCAGCCGTCCTGCTCATTACCATGTCCTGTGGGACGAGAACAATTTTTCTGCTGATGGATTACAGACTCTAACCAACAACCTCTGCTACACTTATGCAAGGTGTACACGCTCTGTTTCAATTGTGCCTCCTGCCTATTATGCTCATCTTGCTGCGTTTCGAGCTCGGTTCTACATGGAACCAGAGACTTCTGACAGTGGATCAATGGCAAGTGGCGCATATGCTGCTAGTCGTGGAATGGGTGGCAGTGCAAATCGCAGCACCCGGGCACCTGGTGTCAATGCTGCTGTGAGGCCTCTTCCTGCATTGAGGGATAATGTGAAGAAGGTCATGTTTTACTGCTAA 3408 0.4762 LSNFFACSQILVRENNLSLSAFFFSHSLLLSTLAFKSTSTVSPFYFLQVLIMGRKRRTEGPSGGEINEHQQHPAERSAPPPQQFAPPAGVAGGHQGGRGGYAPQGGRGGGYGGRGRGNSQQQYGGPPDYQQGRGRGGPPQQGGRGGGYGGGRSEYGGGSRGGGGYGGGGGRGGGMGSGRGVGPGTSFDGPSRPPYPELHQATPVPYQAGVTPQSTPAEAGPSSQAPEPLPVEQQMEQLSIQLEADDVPAPPPVAPPASKSSIRFPLRPGKGTFGHKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVKLYRESHLGKRLPAYDGRKSLYTAGPLPFVSREFRVSLIDEDDGSGAQRREREFKVVIKMAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSQRPMSDSDRVKIKKALRGIRVEVTHRGNMRRKYRISGLTSQATRELTFPVDEMGTMKSVVEYFFETYGFIIKHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEFGIKISEKLAHVEARILPPPRLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFARNVQDSVARGFCFELAQMCQISGMAFNPDPVVPALGARPDQVEKVLKNRHSDAKSRLKGQDLDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDYSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMVKELLISFRRATGQKPTRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHNDRGSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGAYAASRGMGGSANRSTRAPGVNAAVRPLPALRDNVKKVMFYC 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0497 1135 ProSiteProfiles Piwi domain profile. 760 1081 IPR003165 GO:0003676
Lal8g0497 1135 SMART DUF1785_2 419 471 IPR014811 -
Lal8g0497 1135 MobiDBLite consensus disorder prediction 206 230 - -
Lal8g0497 1135 CDD Piwi_ago-like 630 1080 IPR045246 -
Lal8g0497 1135 Gene3D paz domain 465 590 - -
Lal8g0497 1135 SMART Piwi_a_2 760 1081 IPR003165 GO:0003676
Lal8g0497 1135 Pfam Piwi domain 761 1080 IPR003165 GO:0003676
Lal8g0497 1135 Pfam Argonaute linker 1 domain 420 470 IPR014811 -
Lal8g0497 1135 SMART PAZ_2_a_3 476 608 IPR003100 GO:0005515
Lal8g0497 1135 Pfam Mid domain of argonaute 669 744 IPR032473 -
Lal8g0497 1135 Pfam Glycine-rich region of argonaut 154 244 IPR024357 -
Lal8g0497 1135 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 160 1134 - -
Lal8g0497 1135 Gene3D - 829 1135 IPR036397 GO:0003676
Lal8g0497 1135 MobiDBLite consensus disorder prediction 57 230 - -
Lal8g0497 1135 PANTHER PROTEIN ARGONAUTE 1A 160 1134 - -
Lal8g0497 1135 ProSiteProfiles PAZ domain profile. 472 586 IPR003100 GO:0005515
Lal8g0497 1135 CDD PAZ_argonaute_like 471 585 - -
Lal8g0497 1135 Pfam Argonaute linker 2 domain 612 658 IPR032472 -
Lal8g0497 1135 Pfam PAZ domain 476 601 IPR003100 GO:0005515
Lal8g0497 1135 SUPERFAMILY PAZ domain 278 623 IPR036085 GO:0005515
Lal8g0497 1135 Pfam N-terminal domain of argonaute 276 410 IPR032474 -
Lal8g0497 1135 SUPERFAMILY Ribonuclease H-like 749 1081 IPR012337 -
Lal8g0497 1135 Gene3D - 650 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0497 Lal-Chr8 3394557 3402345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0497 131 1135 Eukaryotic Initiation Factors Gene Family AT1G48410 78.175 0.0 1593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0497 K11593 - gmx:100780375 1712.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0497 8 3394557 3402345 Lal25g0509 25 3606750 3614737 LSH
Lal8g0497 8 3394557 3402345 Lal10g0923 10 16606714 16613879 LSH