Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0488 ATGGATGGCGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCCACATCCTTTAAGAGCCACTTGGGTCTCCAGCTCATGTCATCGATGCCCGAGAAACCTCTGCTAGGAGCACGCAATGCTGCGGTTTTGTCTGGTAATCATGGGGGATTTCACCATAGGGACATTGGGATGCCTCATGCTACATACCCTATGGATAACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTTTATGAATATGATACCTACCAACCCGACTTATGGAGATATTCCGGAGACATCTTCAGCATATCATATGCAAATGATTCAACCACCTGAGGTGCCAAAGGAAGAAAGAGCAATTGAAGAAGAGCCCGTTGTTGATAAGGTGAACAGCACTAGTAAGAAAAGGCAGGGCAAGGTTCCCAGATCCCCTAAGGTAAAGAAGTCCAAGAGGGGTCCTCATATGCTTAAGGATGAGAATGCTCCTTCAGTTCAACGGGCAAGGATTCCAAAGAAAACTGCTGAAATTGTAATAAATGGGATTGATATGGATATTTCCAGTATTCCAATTCCTGTCTGTTCATGCACCGGGATACCTCAGCAGTGTTATAGGTGGGGTTCTGGTGGGTGGCAGTCTGCATGTTGCACAACAGGCATGTCAATTTATCCTTTGCCTATGAGTACCAAGCGGCGTGGAGCTAGGATTGCTGGTAGAAAAATGAGTATAGGAGCATTTAAGAAAGTTCTAGAGAAACTTGCAGCGGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAATAAGTTCGTCACTATCAGGTAG 846 0.4444 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGARNAAVLSGNHGGFHHRDIGMPHATYPMDNMRDAWISSQREKFMNMIPTNPTYGDIPETSSAYHMQMIQPPEVPKEERAIEEEPVVDKVNSTSKKRQGKVPRSPKVKKSKRGPHMLKDENAPSVQRARIPKKTAEIVINGIDMDISSIPIPVCSCTGIPQQCYRWGSGGWQSACCTTGMSIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0488 281 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 281 - -
Lal8g0488 281 MobiDBLite consensus disorder prediction 122 166 - -
Lal8g0488 281 SMART GAGA_bind_2 1 281 IPR010409 -
Lal8g0488 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Lal8g0488 281 PANTHER - 1 281 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0488 Lal-Chr8 3313534 3314379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0488 1 281 BBR or BPC Transcription factor family AT2G01930 48.993 6.79e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lal8g0488 GAGA_bind 4.1e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0488 - - gmx:606296 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0488 8 3313534 3314379 Lal8g0488 8 3313534 3314379 ECH