Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0485 ATGCCACAGAATAAGATTTTCTTCTCATCACAGAATCAGATTCCTGATCTTTCACTTAACATTAGTCTCCCAAACAGTGCTCCTTCTTCAATTTGCACTGAAGGGGGTTCTTCTTTTTCTTCACCCTTTGATATATGGAGAGCAGATACTGATGAAGGTGCAGCCTTCAAATCCCATAGTGATAGTTCAATCAGAGGAATTAGCCCTCACACTTACACAGACATAAAACTTTCCCTTTCCAACAACAATAACAATAACCCTAAAAGTAAAACTCCCTCTGAGGCTGAGAGCCCTTGGAGGAAAAACCTTGTTAGATCAATCAGAGAATCACAAGTCACAACAGTAACAAATCATCATGGGGTTTCATCAGTTTCTGAGGGTGCAGTAATAACAAGGCCTTTCAATAGAATCCCTCTCTACACTAGTAACTTTCCTTCTTCATTGGACAATAGTTCCTCAATAGAGAGAATAAACTCCAAGTTTTCACCATATGCAGTTAATTCATCTAATTCAGCTTTTTATAATACTTATATTGGTGTTAAGGGTGTGGAACCAATCTCAAGGTTTAATGGTACAGCCATGGAGAGTTTAACACCTCACCAGCAGCTTCAATACTTGAACCATCATCAGCAGCAGCAGAATCAGTTTGGGATTGGAGGTTCTGACTTTGAAAATGGATTTGTGAGATCAACAATGTTGCATAGGCTACAAAGTAAGAAGAACATGAGGGCTCCAAGAATGCGTTGGACTAGTTCTCTTCATGCTCGTTTTATTCATGCTGTTGAGCTGCTTGGAGGCCATGAAAGGGCTACCCCAAAGTCAGTTCTGGAACTCATGGATGTCAAAGATCTAACACTGGCTCATGTCAAGAGTCACTTGCAGATGTATAGGACTATTAAGAACACTGACAAGCCAGTAGCCTCTTCATCAGATGGAGATGAAGATTTCATGTCCCTATCACCACCCCTTAATCCTAATAAGAACTGTTTACCAAATCAAAGATCAGAAATTTCAAATGTATCTCTTGATCAAAGTAATTCGGGCTATAATTCAAGCAATCTATGGGGAAATTCTTCTTCCAGTGAAGGAGCATGGATACATGTTATTAATTCCAGAGATTTGAATGAGCTTAGTTCAGAAGAAATCCTATCATCTCAGCATATTGAGAAGCTTGCAGAGGGAAGCAACTATATGCAATCAAGAAGCTTCAAGGATCAAAATATAGAGTGTCAAAATCCAAGCTTGGAATTTACCTTAGGGAGATCAAATTGGCACAGCAATGAACATGCCTAA 1293 0.3929 MPQNKIFFSSQNQIPDLSLNISLPNSAPSSICTEGGSSFSSPFDIWRADTDEGAAFKSHSDSSIRGISPHTYTDIKLSLSNNNNNNPKSKTPSEAESPWRKNLVRSIRESQVTTVTNHHGVSSVSEGAVITRPFNRIPLYTSNFPSSLDNSSSIERINSKFSPYAVNSSNSAFYNTYIGVKGVEPISRFNGTAMESLTPHQQLQYLNHHQQQQNQFGIGGSDFENGFVRSTMLHRLQSKKNMRAPRMRWTSSLHARFIHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTIKNTDKPVASSSDGDEDFMSLSPPLNPNKNCLPNQRSEISNVSLDQSNSGYNSSNLWGNSSSSEGAWIHVINSRDLNELSSEEILSSQHIEKLAEGSNYMQSRSFKDQNIECQNPSLEFTLGRSNWHSNEHA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0485 430 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 430 - -
Lal8g0485 430 MobiDBLite consensus disorder prediction 79 99 - -
Lal8g0485 430 Pfam Myb-like DNA-binding domain 246 297 IPR001005 -
Lal8g0485 430 SUPERFAMILY Homeodomain-like 242 299 IPR009057 -
Lal8g0485 430 MobiDBLite consensus disorder prediction 79 93 - -
Lal8g0485 430 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 430 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lal8g0485 430 Gene3D - 244 301 - -
Lal8g0485 430 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 245 299 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0485 Lal-Chr8 3269372 3277116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0485 125 425 G2-like Transcription Factor Family AT5G16560 39.185 7.95e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal8g0485 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0485 - - lang:109340070 728.398