Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0473 ATGGTATTCAAGGGTAGATTCTTCTCTTCCAAAAAATCCGATTCCTCAAATTCAAGCCCTGATGCTTCTTCCACCAACAATAGTCCTCGATCATTCACCTCCAATTCCCCTTTCACATCCCACAACAACAACGATTCCAAATCACCTTCCACTAAACCCTTACCAACCACCGCCGCAGGTGCCGCCTCGTCACGGAGGACGCTACTGAAGGACGGAACACGGAACAAGGATGTGATCAAAGGAAAAGAAACTCAGAATCAGGAGATTGAGTCTCGTTCCAAGAAGTTAACGGTGACGGCGACGGTGACGGCGGAAGGTAAGGAATCATCGCCCTCGTTGTCATTGTCGCCGATTCTGGCGTCGTCGCTGGGCTTGAATAAGATAAAGACGAGATCAGGACCGTTGCCGCGGGAGAGTTTTTTCGGGTTTAGGAGTGATGACAAGCTTGGTGCAAGTAACCTCTCTAGGAATGGTGCCGGTGGTGGGAAGAAGAAGGAAAACAGATTAGGGTTTCAGGAGAGTGGAGCTTCGGTTGATAATTATGATCACATGCCCACGGGGAGTGCACATTTCAGGGAACGGAGTCCGATTGTATCGCCGCCACAGGGTGGGGAATTAGCCGCGGAGGCTGAAGCAGGGAAGCAGGCATCATCAAGGGCTCAGACTGGAGGCTTAGGAACTGCAGATGTTTGCACTCCAGAGACAGCATATGATTATGAAAACCCAAAGGAGTCCGAGTCTCCTCGTTTTCAAGCTATATTACGTGTCACAAGTGCACCTAGGAAGAGGTTTCCTGCAGACATCAAGAGTTTTTCCCATGAGTTGAATTCAAAAGGTGTCCGACCTTTTCCTTTTTGGAAGCCTCGAGGGCTAAATAACCTGCAGGAGATATTGGTCGTTATCAAGGCAAAATTTGATAAAGCAAAGGAAGAGGTTAACTCTGACCTGGCTGTTTTTGCAGCAGACCTGGTTGGAATTCTTGAAAAAAATGCAGATATTCATCCCGACTGGCAAGAGACAATTGAAGACATGCTAATTTTGGCTAGGAGGTGTTCTATGACTTCATCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGATTTGGATGATAGGCGTCAAGAGCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCAGATTATTGCAGTTCCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTCAATCTTCACCAATCCAGAGTCTTGCATTCTGCTGAAAGAGGTATTCCTCCTGGTTTGGGAAGGGATGCTAAAAGTTCAAGTGCTGCAAGGGCCTTTAAAACTTCAACAAAAAAAGCATACAGTCAAGAGCAGAGTAGTACCTTGGGATGGAAGAAAGATGTTGTGCAACCAAAAAAGCTATCACTTCCTGCTGCTGATGAAACTTCGAAACACATGAAGTCTCCTTCTGGAAGGAACCGAATGGCTTCTTGGAAGAAATTTCCATCGCCATCAGGAAAAAGGCCAAAGGAAGCTTTACATTTGAAGGACCAAAATAATGGGAGAGTTGAACCTTCAAAGACACCAAATAATAATAGATGCATTTCTGATGTGGATCTCTTTGCTGCTAAGCCATCTGAGGTTGTTCCTATCAAAGATTTCCGGGACAATGGTTCCAAGCACCAACGCAAAGTTTCCTGGGGCTACTGGGGTGATCAGCAGAAAAATAATGAAGAGAGCTCAATAATTTGCCGTATATGCGAGGAGGAAGTACCTACTTCACATCTTGAAGATCATTCAAGGACTTGTGCAGTTGCTGATAGATGTGATCGGAAGGGTCTGAGTGTTAATGAGCGCCTTGTCAGAATTGCTGAAACACTAGAAAAGATTATGGAATCATGTACACAAAAGGATACTCAACAGATAGTGGGAAGTCCCGATGTTGCAAAAGTTTCAAATTCAAGTATGACAGAAGAATCTGACATTCTTTCCCCTAAACTTAGTGATTGGTCTCACAGAGGCTCAGATGATATGCTAGACTGTTTCCCTGAATCTGATAATTCTGTTTGCATGGATGGATTATCACTTATGTCATGTCAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGGAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGACTTGCTATTGACAGGGAAGGGTGCTTATTCTGAGCATGATGATCTGCCACAGATGAATGATCTTGCTGATATAGCACGATGTATAGCAAGCACACGTCTGGATGATGATCGATCAACGTCATACTTATTAACTTGTCTTGATGACTTGCGGGCTGTTGTGGAACGAAGGAAGTTTAATGCACTAACCGTTGAGACCTTTGGAACACGAATTGAGAAGCTTATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTCGTAAAGGTAGATATAGAGAGCACTGTAATTGATGATGATGTTCTCATGGAAGATGATGTGGTTCGTAGTTTGAGAACAACCCCGGTGCATTCTTCGAGGGATCGTACTTCTATTGATGACTTTGAGATTATAAAGCCTATCAGTCGTGGGGCATTTGGACGGGTGTTCTTGGCTAAAAAGAGAACAACCGGTGATCTTTTTGCAATAAAGGTTCTGAGGAAGGCAGATATGGTCCGTAAGAATGCTGTGGAAAGTATATTGGCAGAACGTGATATTTTAATTACAGTCCGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACATGTCGTGAGAACCTGTATCTTGTCATGGAGTATCTTAATGGAGGTGATCTGTATTCATTATTAAGAAATTTAGGTTGCCTAGATGAGGAAGTTGCCCGTGTATATATCGCTGAAGTGGTGCTCGCATTAGAGTATTTGCATTCACTGCGTGTGGTTCATCGTGACTTGAAGCCGGACAATTTATTGATTGCACATGATGGTCACATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAACAGCACAGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGTGAGGACGAGCCTCACTTGCCTACATCTGAGCATAAAAGGGAGCTGAGGAAGAAACGTTCTGCTGTGGGAACACCTGATTATTTGGCACCAGAGATACTCTTGGGAACTGGACATGGGTATACAGCAGATTGGTGGTCTGTTGGGGTCATCTTATTTGAGTTGCTTGTTGGCCTTCCACCCTTCAATGCAGAGCATCCTCAGAGCATATTTGAAAATATTCTTAATCGCAAGATACCTTGGCCTGCAGTTCCTGAGGAAATGAGTCCTGAAGCTCAAGATCTTATTGATCGGTTATTGACTGAAGATCCTGATCTAAGACTGGGAGCCAGAGGGGCATCTGAGGTGAAGCAACATGTATTCTTCAAGGATATTAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGATACCAGTTACTTTACTTCTCGCTACTCGTGGAATACTTCTGATGGGCATGTGTATCCAACAAGTGATGCAGAGGATTCTAGTGATGCTGATAGCTCAAGTGGCAGCAGTGGTTGCTTGAGCAATCGCCATGATGAAGTGGGAGATGAATGTGGGGGTCTTGCCGAGTTTGATTCTGGTCCATCTGTCAATTACTCTTTTAGTAATTTCTCCTTTAAGAATCTCTCCGAGCTTGCATCAATCAACTATGATCTTCTTACAAAGGGTTGGAAAGATGATCCGTCAACAAATTTTAGTACATAG 3828 0.4431 MVFKGRFFSSKKSDSSNSSPDASSTNNSPRSFTSNSPFTSHNNNDSKSPSTKPLPTTAAGAASSRRTLLKDGTRNKDVIKGKETQNQEIESRSKKLTVTATVTAEGKESSPSLSLSPILASSLGLNKIKTRSGPLPRESFFGFRSDDKLGASNLSRNGAGGGKKKENRLGFQESGASVDNYDHMPTGSAHFRERSPIVSPPQGGELAAEAEAGKQASSRAQTGGLGTADVCTPETAYDYENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPFPFWKPRGLNNLQEILVVIKAKFDKAKEEVNSDLAVFAADLVGILEKNADIHPDWQETIEDMLILARRCSMTSSGEFWLQCEGIVQDLDDRRQEHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLHQSRVLHSAERGIPPGLGRDAKSSSAARAFKTSTKKAYSQEQSSTLGWKKDVVQPKKLSLPAADETSKHMKSPSGRNRMASWKKFPSPSGKRPKEALHLKDQNNGRVEPSKTPNNNRCISDVDLFAAKPSEVVPIKDFRDNGSKHQRKVSWGYWGDQQKNNEESSIICRICEEEVPTSHLEDHSRTCAVADRCDRKGLSVNERLVRIAETLEKIMESCTQKDTQQIVGSPDVAKVSNSSMTEESDILSPKLSDWSHRGSDDMLDCFPESDNSVCMDGLSLMSCQTRFGPKSDQGMTTSSGGSMTPRSPLMTPRTSQIDLLLTGKGAYSEHDDLPQMNDLADIARCIASTRLDDDRSTSYLLTCLDDLRAVVERRKFNALTVETFGTRIEKLIREKYLQLTEMVDVVKVDIESTVIDDDVLMEDDVVRSLRTTPVHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLRKADMVRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPHLPTSEHKRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGLPPFNAEHPQSIFENILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPDLRLGARGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGHVYPTSDAEDSSDADSSSGSSGCLSNRHDEVGDECGGLAEFDSGPSVNYSFSNFSFKNLSELASINYDLLTKGWKDDPSTNFST 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0473 1275 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 45 1272 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 1035 1051 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 505 522 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 1195 1216 - -
Lal8g0473 1275 Coils Coil 291 311 - -
Lal8g0473 1275 SUPERFAMILY Protein kinase-like (PK-like) 860 1190 IPR011009 -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 443 462 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 1024 1051 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 131 229 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 1195 1218 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 69 90 - -
Lal8g0473 1275 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 1272 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 1 93 - -
Lal8g0473 1275 ProSiteProfiles AGC-kinase C-terminal domain profile. 1153 1257 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lal8g0473 1275 MobiDBLite consensus disorder prediction 706 728 - -
Lal8g0473 1275 SMART serkin_6 863 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0473 1275 MobiDBLite consensus disorder prediction 646 665 - -
Lal8g0473 1275 ProSiteProfiles Protein kinase domain profile. 863 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0473 1275 MobiDBLite consensus disorder prediction 646 670 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 476 532 - -
Lal8g0473 1275 MobiDBLite consensus disorder prediction 9 63 - -
Lal8g0473 1275 Pfam Protein kinase domain 863 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal8g0473 1275 MobiDBLite consensus disorder prediction 427 462 - -
Lal8g0473 1275 Gene3D Phosphorylase Kinase; domain 1 861 1181 - -
Lal8g0473 1275 Gene3D Transferase(Phosphotransferase) domain 1 947 1170 - -
Lal8g0473 1275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Lal8g0473 1275 CDD STKc_MAST_like 869 1157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0473 Lal-Chr8 3160048 3171612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0473 53 1269 AGC Kinase Gene Family AT3G17850 64.753 0.0 1572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Lal8g0473 Pkinase 9.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0473 - - gmx:100776995 1949.87