Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0465 ATGATGGGTTATGAAGAAGACGGTGAGTTCAACATGGTTGATTCTTCATTCAATGGAAGGAAACTCAGTCTTCTCATGCCAAGGCCAATCACTTCTCCTAATAACAACACTTCAATAATAACACCAACCACTCCTTTCTTAAACCACATTCATGCCAATGATTTCTTTTCACAATATCATCATCATCATGCAACAATGGTAGATCATAGCAGGAGAGATCAGTTCAATGTTGTTCCACCAGTTGTGGTGAGTTCAAGGTGGAATCCAACACCAGAGCAGCTAAGAGCACTTGAAGAATTGTATAGAAGAGGGACAAGAACACCATCTGCAGAACAAATCCAACACATAACTTCACAGCTTAGAAAGTTTGGTAAGATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCATAAAGCTAGAGAAAGGCAAAAGCGCCGACGTCAAATTGCATCTTCTGTTGCTGATCATGGTGATCACCACCACCATGATTCTGATACTCCAGAGAAAAAGGAACTAGCTGCAAGTAGGACAGTGTTTGAAGTTGAACAAATCAAGAACCAGGCACCCTCTACAAACTGCAATAGTACTCTTGCAGAGGAATCTGTTTCAATAGAAATGGCAGAAAAGGCAGAGAATGCAGTGTATAAAACATATGGATGGCTCCAATTCGATGAAGGGGAATTAGAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGAGGCATGTCAAACAGTTTTCTTGTCCTACTCCTGCACCTGCCACTTACCTCATAAACACTACACCACCTTATTATTATTATAACAATAATGCATCAACTACAGTAACAAGAACAATGGACCCAACAAAGCTCATTAAGACACATCATGATCTCAGCTTCTTTATTTCACCTCAGAGAGAAAATGGTGTTATCCACTTAAGTAGTTATAATAACACTGGTATTGAAGGTGATGATAAGTGTGTGGAATCTAATCAAACACTGCTACTTTTCCCTTTAAGTAGTAGTGATGGAAGCAGTAATAACATTAACGATAAAGACACAGAGATATCAGACTCAGCAATGAATGCAAACTTGACTCCTAGTCAGTTTTTTGAGTTCCTTCCATTGAAGAACTAA 1119 0.387 MMGYEEDGEFNMVDSSFNGRKLSLLMPRPITSPNNNTSIITPTTPFLNHIHANDFFSQYHHHHATMVDHSRRDQFNVVPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITSQLRKFGKIEGKNVFYWFQNHKARERQKRRRQIASSVADHGDHHHHDSDTPEKKELAASRTVFEVEQIKNQAPSTNCNSTLAEESVSIEMAEKAENAVYKTYGWLQFDEGELEQRRNFMERNATRHVKQFSCPTPAPATYLINTTPPYYYYNNNASTTVTRTMDPTKLIKTHHDLSFFISPQRENGVIHLSSYNNTGIEGDDKCVESNQTLLLFPLSSSDGSSNNINDKDTEISDSAMNANLTPSQFFEFLPLKN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0465 372 MobiDBLite consensus disorder prediction 147 172 - -
Lal8g0465 372 SUPERFAMILY Homeodomain-like 85 149 IPR009057 -
Lal8g0465 372 Gene3D - 83 145 - -
Lal8g0465 372 MobiDBLite consensus disorder prediction 143 172 - -
Lal8g0465 372 PANTHER WUSCHEL, PUTATIVE-RELATED 7 262 - -
Lal8g0465 372 PANTHER WUSCHEL, PUTATIVE-RELATED 290 372 - -
Lal8g0465 372 SMART HOX_1 82 149 IPR001356 GO:0003677
Lal8g0465 372 Pfam Homeodomain 85 144 IPR001356 GO:0003677
Lal8g0465 372 ProSiteProfiles 'Homeobox' domain profile. 90 145 IPR001356 GO:0003677
Lal8g0465 372 CDD homeodomain 86 146 IPR001356 GO:0003677
Lal8g0465 372 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 262 IPR044555 GO:0003700|GO:0099402
Lal8g0465 372 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 290 372 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0465 Lal-Chr8 3110478 3113639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0465 2 372 Wox Gene Family AT3G18010 34.422 3.03e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal8g0465 Homeodomain 1.6e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0465 8 3110478 3113639 Lal8g0465 8 3110478 3113639 ECH