Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0461 TGTTGTGACCTATGTGGGAAGTTGTTGGAAGACTGTTTATTTTCTGAAGAGCCCACTTTTGTCAAAAGTTCTTCTGGCCAGAGCCAATTATCAGGCCATTATGTAAGAACAATTCAAGGCGAGTTCTCTGCTTCACGTCAAAGGACTTTAGATAGAGCTTATGATGAAATGCATTATTTAAGTTGTAACCTTGGAGTGGAAGATAATAACATGGCCAGACAAGCTCTGGCCTTTTTTAGAATAGCACTTGAGAGAAAGTTCACAAGGGGACGTAAATCAGAACAAGTACAGGCTGCTTGTCTCTATATTGCATTCCGGGCAAATGATAAGCCATACCTTCTTATTGATTTTTCAAATTGGTTAAGGATAAATGTTTATGTGCTAGGTGCAGTTTTTTTGCAGCTTTGTAGAGTATTAAGTCTCTCAGAACACCCAATTGTTCAAAAATCTGTTGATCCCAGTCTGTTTATTTATAAATACACGAATAATTTGTTAAAGGAAAGGAATGTGCGTGTGTCTGAAACTGCACTGAATATTATTGCCAGCATGAAACGTGATTGGATGCAGACAGGGAGGAAGCCTAGCGGATTATGTGGTGCAGCAATATACATAGCAGCTCTTGCACATGGTTTTAAGTTCTCTAAGTCAGATATTCTTAGGATTGTCCATGTCTGTGAAGCAACATTGACTAAGCGCTTAGTAGAGTTTGAGAATACAGATTCTGCTAACTTGACAATTGAGGAGTTAAATGAGATGGCAAAAGAGCAGGAAAAAAATCCAATTAAAATAGCTGATGGTCAATTCAACAATTGTACTTCAAAGGATCTACTATGTGAACACAAGGATAGTGATGTTCCCTATTTTGCACTAGGACTATGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGGTGGTGGTTTGGATCCTCCTGCATTCCAGCGAGCTGAAAAGGAGAGAACCGCAAAATCGCATTCTGAGGAAAGCGCCGATAAATCAGATGATTTGGTGAAAGCAACAAATGGTGCAGATGAGACTAGAATAGAAAATTTACATGCCTCTGAGTCCGAAGGGGATACTATACATGTGTCCATTAAATCTGGTCAACTTGATGAGTCACATGAAGATGAAGATATGAATATGAATACTTCCAATGATTCAGAAACTTTCTCTGATATTGATGATAACGAGGTTGATGATTACATTGCCGATGAGGAAGCAAAGCAACAGAAGAAGATTTTATGGGAGAATGAGTTTTCAGAGTATCTTAAGGAACAAGCTGACAGGGTAGCCACTGCAGCAAAAACCAGAAAGAGACGACCTCAAGAGGCAAAAAACTCAGGTCCCTTTCAATCTGCTGCAGAGGCCACTCGCCAAATGTTTGAAAAAAAGAGAATCAGCTCCAAAATCAATTACAGTAACTTGGACAAATTATATGAACTAGGGGCTTCCGAAAATGGCAAGAAAGTACGATTTGAGGTACCTTCTGATGATCACGATAATATTGAGTCAAAGGTTGAGGACAATATAAAAGATGACAAAGATGAAATTGAGAAAACGGATGATGAATATGACAATTCTTTGTACGAAGAAAATGTAGACCAGAAATATGACTACGAATATGATGATTATTATTCTAACTATGATTGTTGA 1662 0.3815 CCDLCGKLLEDCLFSEEPTFVKSSSGQSQLSGHYVRTIQGEFSASRQRTLDRAYDEMHYLSCNLGVEDNNMARQALAFFRIALERKFTRGRKSEQVQAACLYIAFRANDKPYLLIDFSNWLRINVYVLGAVFLQLCRVLSLSEHPIVQKSVDPSLFIYKYTNNLLKERNVRVSETALNIIASMKRDWMQTGRKPSGLCGAAIYIAALAHGFKFSKSDILRIVHVCEATLTKRLVEFENTDSANLTIEELNEMAKEQEKNPIKIADGQFNNCTSKDLLCEHKDSDVPYFALGLCETCYKDFDKLSGGLGGGLDPPAFQRAEKERTAKSHSEESADKSDDLVKATNGADETRIENLHASESEGDTIHVSIKSGQLDESHEDEDMNMNTSNDSETFSDIDDNEVDDYIADEEAKQQKKILWENEFSEYLKEQADRVATAAKTRKRRPQEAKNSGPFQSAAEATRQMFEKKRISSKINYSNLDKLYELGASENGKKVRFEVPSDDHDNIESKVEDNIKDDKDEIEKTDDEYDNSLYEENVDQKYDYEYDDYYSNYDC 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0461 553 MobiDBLite consensus disorder prediction 435 459 - -
Lal8g0461 553 CDD CYCLIN 172 227 IPR013763 -
Lal8g0461 553 MobiDBLite consensus disorder prediction 316 341 - -
Lal8g0461 553 Gene3D - 152 245 - -
Lal8g0461 553 Gene3D Single helix bin 386 438 - -
Lal8g0461 553 Gene3D - 43 143 - -
Lal8g0461 553 SMART cyclin_7 155 238 IPR013763 -
Lal8g0461 553 SMART cyclin_7 55 137 IPR013763 -
Lal8g0461 553 Coils Coil 239 259 - -
Lal8g0461 553 MobiDBLite consensus disorder prediction 372 395 - -
Lal8g0461 553 Pfam Transcription factor TFIIB repeat 47 135 IPR013150 GO:0017025
Lal8g0461 553 Pfam Transcription factor TFIIB repeat 149 238 IPR013150 GO:0017025
Lal8g0461 553 PANTHER TRANSCRIPTION FACTOR IIIB 90 KDA SUBUNIT 1 486 IPR029529 GO:0000126|GO:0000995|GO:0006383
Lal8g0461 553 Pfam Brf1-like TBP-binding domain 394 482 IPR011665 -
Lal8g0461 553 CDD CYCLIN 75 119 IPR013763 -
Lal8g0461 553 MobiDBLite consensus disorder prediction 496 539 - -
Lal8g0461 553 SUPERFAMILY Cyclin-like 53 141 IPR036915 -
Lal8g0461 553 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 486 IPR000812 GO:0006352|GO:0070897
Lal8g0461 553 SUPERFAMILY Cyclin-like 151 244 IPR036915 -
Lal8g0461 553 Coils Coil 506 526 - -
Lal8g0461 553 MobiDBLite consensus disorder prediction 311 341 - -
Lal8g0461 553 MobiDBLite consensus disorder prediction 496 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0461 Lal-Chr8 3061921 3069504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0461 2 467 Inorganic Solute Cotransporters AT2G01280 37.849 2.53e-92 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0461 K15196 - gmx:100817609 594.734