Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal8g0454 ATGAACCAAAAGACAGAGACAGAATGCGTAAGCGTGGAACGTGAAACCCATAAGCGTGAAGCTGATTCAGAAAGCGAGGACCATCTTGTTAATGCGAAAAAGTCAAGGACTGAATCTTCAAATAGTGGAAACGCTGAAGTTGGTATTGTTGATGGTGCAAAGGAAGTAACTTTCAATATTGAAGCAGATGTAGCTGAAGATAAGGGGTCTAGGCATACAATGGAAGATGCTTGGGTGGTGCTTTTGGATGCTAGTTTAGATTACCCTGGAAAATTAAGGTGTGCACACTTTGCAATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAGTATGCTCAAAAGCATTTGCATGGAAATGTCATGTCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGGCAGCTAAAAGAGCTATACTTGATGGTTTTCGTAGAACTGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGGTGGCAGGATGGTGCTACAGCTGTATGTGCTTGGGTATTGGGACAAAAAGTTTTTGTTGCGAATATAGGTGATGCCAAAGCAGTTTTAGCTCGGTCAACTATAGTTGATGGATCCCAAGATCACTCAAACGGAGTCAATGTGCTGAAAGCCATTGTTTTGACGAGAGAACACAAACCCATCTTCCCACAGGAGCGTGCACGTATTCAGAAGGCTGGTGGTGTTGTCAGCTCAAATGGACGATTACAAGGACGTCTAGAAGTTTCCAGGGGTTTTGGAGATCGCCAGTTCAAAAAGGTGGGTTTTATTGCAACCCCAGATATCCATTCTTTTGACCTTAGTGGTAGAGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAATTATTGAAGGAGGGGCTACCTGTTACAGCTGTGAGCCGCCGTCTTGTCAGGGAAGCTGTTCGTGAACGTCGCTGTAAAGATAACTGCACTGCGATTGTTATTGTATTCAAGCATATGAGTGATTCCTAA 1026 0.4415 MNQKTETECVSVERETHKREADSESEDHLVNAKKSRTESSNSGNAEVGIVDGAKEVTFNIEADVAEDKGSRHTMEDAWVVLLDASLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHGNVMSAGLPRELLDVKAAKRAILDGFRRTDESLLQESAEGGWQDGATAVCAWVLGQKVFVANIGDAKAVLARSTIVDGSQDHSNGVNVLKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEVSRGFGDRQFKKVGFIATPDIHSFDLSGREHFIILGCDGLWGVFGPSDAVDFVQKLLKEGLPVTAVSRRLVREAVRERRCKDNCTAIVIVFKHMSDS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal8g0454 341 MobiDBLite consensus disorder prediction 8 34 - -
Lal8g0454 341 Pfam Protein phosphatase 2C 64 323 IPR001932 -
Lal8g0454 341 SMART PP2C_4 55 333 IPR001932 -
Lal8g0454 341 CDD PP2Cc 64 335 IPR001932 -
Lal8g0454 341 ProSiteProfiles PPM-type phosphatase domain profile. 61 335 IPR001932 -
Lal8g0454 341 MobiDBLite consensus disorder prediction 1 48 - -
Lal8g0454 341 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 12 332 - -
Lal8g0454 341 PANTHER PROTEIN PHOSPHATASE 2C 12 332 IPR015655 GO:0004722|GO:0006470
Lal8g0454 341 Gene3D - 50 338 IPR036457 -
Lal8g0454 341 SUPERFAMILY PP2C-like 58 337 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal8g0454 Lal-Chr8 3021506 3026338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal8g0454 6 287 PP2C-type Phosphatase Gene Family AT1G18030 65.541 3.82e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal8g0454 K17500 - vvi:100257757 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal8g0454 8 3021506 3026338 Lal8g0454 8 3021506 3026338 ECH